Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.07■□□□□ 0.48
CHRNA3P32297 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRNA3P32297 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA3P32297 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA3P32297 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA3P32297 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA3P32297 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.07■□□□□ 0.48
CHRNA3P32297 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA3P32297 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CHRNA3P32297 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA3P32297 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRNA3P32297 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA3P32297 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA3P32297 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA3P32297 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA3P32297 AC078925.2-201ENST00000624013 1973 ntBASIC18.06■□□□□ 0.48
CHRNA3P32297 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CHRNA3P32297 DOC2GP-204ENST00000639052 2548 ntBASIC18.06■□□□□ 0.48
CHRNA3P32297 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA3P32297 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CHRNA3P32297 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA3P32297 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA3P32297 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA3P32297 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA3P32297 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRNA3P32297 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.06■□□□□ 0.48
CHRNA3P32297 AC079781.3-201ENST00000449110 356 ntBASIC18.06■□□□□ 0.48
CHRNA3P32297 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA3P32297 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRNA3P32297 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA3P32297 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA3P32297 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CHRNA3P32297 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRNA3P32297 AC011467.2-201ENST00000598425 242 ntBASIC18.06■□□□□ 0.48
CHRNA3P32297 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRNA3P32297 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRNA3P32297 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA3P32297 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA3P32297 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRNA3P32297 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRNA3P32297 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CHRNA3P32297 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA3P32297 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA3P32297 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRNA3P32297 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHRNA3P32297 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA3P32297 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA3P32297 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA3P32297 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CHRNA3P32297 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.05■□□□□ 0.48
CHRNA3P32297 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.05■□□□□ 0.48
CHRNA3P32297 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA3P32297 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CHRNA3P32297 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA3P32297 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA3P32297 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA3P32297 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CHRNA3P32297 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA3P32297 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA3P32297 AC132008.2-207ENST00000454517 770 ntBASIC18.05■□□□□ 0.48
CHRNA3P32297 SAPCD2P3-201ENST00000455031 850 ntBASIC18.05■□□□□ 0.48
CHRNA3P32297 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA3P32297 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA3P32297 IGHV3-52-201ENST00000519770 353 ntBASIC18.05■□□□□ 0.48
CHRNA3P32297 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CHRNA3P32297 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.05■□□□□ 0.48
CHRNA3P32297 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA3P32297 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CHRNA3P32297 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CHRNA3P32297 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA3P32297 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA3P32297 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA3P32297 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CHRNA3P32297 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA3P32297 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA3P32297 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA3P32297 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHRNA3P32297 RNF216P1-203ENST00000404404 2427 ntBASIC18.04■□□□□ 0.48
CHRNA3P32297 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRNA3P32297 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHRNA3P32297 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA3P32297 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHRNA3P32297 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA3P32297 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA3P32297 INTS4P1-201ENST00000438455 1935 ntBASIC18.04■□□□□ 0.48
CHRNA3P32297 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA3P32297 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CHRNA3P32297 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA3P32297 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA3P32297 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRNA3P32297 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA3P32297 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA3P32297 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CHRNA3P32297 AL160237.2-201ENST00000556165 472 ntBASIC18.04■□□□□ 0.48
CHRNA3P32297 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.04■□□□□ 0.48
CHRNA3P32297 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.04■□□□□ 0.48
CHRNA3P32297 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRNA3P32297 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.04■□□□□ 0.48
CHRNA3P32297 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRNA3P32297 AC104692.2-201ENST00000603054 253 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms