Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC8P31273 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC8P31273 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC8P31273 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC8P31273 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC8P31273 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC8P31273 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC8P31273 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC8P31273 AC002472.2-201ENST00000442739 958 ntBASIC18.48■□□□□ 0.55
HOXC8P31273 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.48■□□□□ 0.55
HOXC8P31273 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HOXC8P31273 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.48■□□□□ 0.55
HOXC8P31273 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.48■□□□□ 0.55
HOXC8P31273 AC097493.3-201ENST00000509725 367 ntBASIC18.48■□□□□ 0.55
HOXC8P31273 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.48■□□□□ 0.55
HOXC8P31273 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.48■□□□□ 0.55
HOXC8P31273 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.48■□□□□ 0.55
HOXC8P31273 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.48■□□□□ 0.55
HOXC8P31273 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.48■□□□□ 0.55
HOXC8P31273 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.48■□□□□ 0.55
HOXC8P31273 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC8P31273 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC8P31273 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC8P31273 LINC02012-201ENST00000608206 1725 ntBASIC18.48■□□□□ 0.55
HOXC8P31273 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC8P31273 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC8P31273 FOXO1B-201ENST00000504678 1527 ntBASIC18.48■□□□□ 0.55
HOXC8P31273 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HOXC8P31273 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
HOXC8P31273 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC8P31273 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HOXC8P31273 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HOXC8P31273 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC8P31273 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC8P31273 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HOXC8P31273 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.47■□□□□ 0.55
HOXC8P31273 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC8P31273 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC8P31273 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.47■□□□□ 0.55
HOXC8P31273 FAM207CP-201ENST00000443486 507 ntBASIC18.47■□□□□ 0.55
HOXC8P31273 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.47■□□□□ 0.55
HOXC8P31273 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.47■□□□□ 0.55
HOXC8P31273 AC105233.2-201ENST00000523697 349 ntBASIC18.47■□□□□ 0.55
HOXC8P31273 AC069120.2-201ENST00000524091 540 ntBASIC18.47■□□□□ 0.55
HOXC8P31273 AF228730.5-201ENST00000530288 346 ntBASIC18.47■□□□□ 0.55
HOXC8P31273 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.47■□□□□ 0.55
HOXC8P31273 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.47■□□□□ 0.55
HOXC8P31273 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.47■□□□□ 0.55
HOXC8P31273 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.47■□□□□ 0.55
HOXC8P31273 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC8P31273 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.47■□□□□ 0.55
HOXC8P31273 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.47■□□□□ 0.55
HOXC8P31273 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC8P31273 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC8P31273 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC8P31273 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC8P31273 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC8P31273 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HOXC8P31273 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC8P31273 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC8P31273 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC8P31273 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.46■□□□□ 0.55
HOXC8P31273 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.46■□□□□ 0.55
HOXC8P31273 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC8P31273 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HOXC8P31273 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC8P31273 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC8P31273 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HOXC8P31273 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC8P31273 AC236430.1-201ENST00000402231 743 ntBASIC18.46■□□□□ 0.55
HOXC8P31273 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.46■□□□□ 0.55
HOXC8P31273 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.46■□□□□ 0.55
HOXC8P31273 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.46■□□□□ 0.55
HOXC8P31273 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.46■□□□□ 0.55
HOXC8P31273 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HOXC8P31273 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.46■□□□□ 0.55
HOXC8P31273 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC8P31273 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC8P31273 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HOXC8P31273 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC8P31273 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC8P31273 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HOXC8P31273 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC8P31273 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC8P31273 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXC8P31273 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HOXC8P31273 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.45■□□□□ 0.54
HOXC8P31273 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC8P31273 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC8P31273 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC8P31273 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC8P31273 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
HOXC8P31273 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC8P31273 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.45■□□□□ 0.54
HOXC8P31273 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HOXC8P31273 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
HOXC8P31273 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.45■□□□□ 0.54
HOXC8P31273 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.45■□□□□ 0.54
HOXC8P31273 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.45■□□□□ 0.54
HOXC8P31273 TSPY16P-201ENST00000449843 468 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms