Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA3P29320 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA3P29320 AL645728.1-201ENST00000366221 2101 ntBASIC16.69■□□□□ 0.26
EPHA3P29320 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA3P29320 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA3P29320 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.69■□□□□ 0.26
EPHA3P29320 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.68■□□□□ 0.26
EPHA3P29320 HYMAI-201ENST00000635591 3347 ntBASIC16.68■□□□□ 0.26
EPHA3P29320 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.68■□□□□ 0.26
EPHA3P29320 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.68■□□□□ 0.26
EPHA3P29320 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.68■□□□□ 0.26
EPHA3P29320 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.68■□□□□ 0.26
EPHA3P29320 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.68■□□□□ 0.26
EPHA3P29320 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
EPHA3P29320 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 BX664615.1-201ENST00000443558 458 ntBASIC16.68■□□□□ 0.26
EPHA3P29320 AC122714.2-201ENST00000502787 707 ntBASIC16.68■□□□□ 0.26
EPHA3P29320 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.68■□□□□ 0.26
EPHA3P29320 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.68■□□□□ 0.26
EPHA3P29320 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.68■□□□□ 0.26
EPHA3P29320 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
EPHA3P29320 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.68■□□□□ 0.26
EPHA3P29320 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
EPHA3P29320 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.68■□□□□ 0.26
EPHA3P29320 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.68■□□□□ 0.26
EPHA3P29320 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
EPHA3P29320 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.68■□□□□ 0.26
EPHA3P29320 PAUPAR-201ENST00000630360 2965 ntBASIC16.68■□□□□ 0.26
EPHA3P29320 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
EPHA3P29320 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA3P29320 AC103702.1-201ENST00000548801 2630 ntBASIC16.67■□□□□ 0.26
EPHA3P29320 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHA3P29320 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
EPHA3P29320 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
EPHA3P29320 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
EPHA3P29320 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.67■□□□□ 0.26
EPHA3P29320 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 AC117947.1-201ENST00000427448 529 ntBASIC16.67■□□□□ 0.26
EPHA3P29320 AC112907.2-201ENST00000448639 330 ntBASIC16.67■□□□□ 0.26
EPHA3P29320 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.67■□□□□ 0.26
EPHA3P29320 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
EPHA3P29320 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
EPHA3P29320 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHA3P29320 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.67■□□□□ 0.26
EPHA3P29320 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
EPHA3P29320 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHA3P29320 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.67■□□□□ 0.26
EPHA3P29320 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
EPHA3P29320 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
EPHA3P29320 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHA3P29320 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 FER1L4-210ENST00000615531 5998 ntBASIC16.67■□□□□ 0.26
EPHA3P29320 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA3P29320 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHA3P29320 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EPHA3P29320 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA3P29320 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
EPHA3P29320 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA3P29320 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EPHA3P29320 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
EPHA3P29320 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA3P29320 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.66■□□□□ 0.26
EPHA3P29320 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms