Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.54■□□□□ 0.24
LAMA1P25391 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
LAMA1P25391 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LAMA1P25391 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.54■□□□□ 0.24
LAMA1P25391 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.54■□□□□ 0.24
LAMA1P25391 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LAMA1P25391 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LAMA1P25391 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LAMA1P25391 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LAMA1P25391 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LAMA1P25391 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.54■□□□□ 0.24
LAMA1P25391 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.54■□□□□ 0.24
LAMA1P25391 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.54■□□□□ 0.24
LAMA1P25391 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.54■□□□□ 0.24
LAMA1P25391 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LAMA1P25391 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LAMA1P25391 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.54■□□□□ 0.24
LAMA1P25391 AC016027.1-202ENST00000607927 1699 ntBASIC16.54■□□□□ 0.24
LAMA1P25391 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LAMA1P25391 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LAMA1P25391 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LAMA1P25391 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.54■□□□□ 0.24
LAMA1P25391 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
LAMA1P25391 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.54■□□□□ 0.24
LAMA1P25391 SPDYE12P-201ENST00000618416 771 ntBASIC16.54■□□□□ 0.24
LAMA1P25391 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.54■□□□□ 0.24
LAMA1P25391 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.53■□□□□ 0.24
LAMA1P25391 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.53■□□□□ 0.24
LAMA1P25391 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.53■□□□□ 0.24
LAMA1P25391 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.53■□□□□ 0.24
LAMA1P25391 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
LAMA1P25391 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.53■□□□□ 0.24
LAMA1P25391 AC104794.3-201ENST00000566840 1248 ntBASIC16.53■□□□□ 0.24
LAMA1P25391 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.53■□□□□ 0.24
LAMA1P25391 MIR4515-201ENST00000584082 81 ntBASIC16.53■□□□□ 0.24
LAMA1P25391 AL162274.1-201ENST00000617191 1098 ntBASIC16.53■□□□□ 0.24
LAMA1P25391 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LAMA1P25391 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LAMA1P25391 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.53■□□□□ 0.24
LAMA1P25391 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.53■□□□□ 0.24
LAMA1P25391 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.53■□□□□ 0.24
LAMA1P25391 AC131009.4-201ENST00000624048 1740 ntBASIC16.53■□□□□ 0.24
LAMA1P25391 HMGA1P7-201ENST00000406908 502 ntBASIC16.53■□□□□ 0.24
LAMA1P25391 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.53■□□□□ 0.24
LAMA1P25391 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.53■□□□□ 0.24
LAMA1P25391 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
LAMA1P25391 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.53■□□□□ 0.24
LAMA1P25391 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.53■□□□□ 0.24
LAMA1P25391 AC004233.3-201ENST00000607794 1269 ntBASIC16.53■□□□□ 0.24
LAMA1P25391 AC017083.2-201ENST00000608069 979 ntBASIC16.53■□□□□ 0.24
LAMA1P25391 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.53■□□□□ 0.24
LAMA1P25391 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 BICD1-207ENST00000551848 1962 ntBASIC16.53■□□□□ 0.24
LAMA1P25391 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LAMA1P25391 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LAMA1P25391 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.52■□□□□ 0.24
LAMA1P25391 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.52■□□□□ 0.24
LAMA1P25391 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.52■□□□□ 0.24
LAMA1P25391 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LAMA1P25391 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LAMA1P25391 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LAMA1P25391 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LAMA1P25391 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
LAMA1P25391 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LAMA1P25391 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LAMA1P25391 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
LAMA1P25391 AC245100.3-201ENST00000441281 285 ntBASIC16.52■□□□□ 0.23
LAMA1P25391 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LAMA1P25391 IGHV3-42-201ENST00000520410 361 ntBASIC16.52■□□□□ 0.23
LAMA1P25391 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.52■□□□□ 0.23
LAMA1P25391 AC008267.7-201ENST00000624570 1194 ntBASIC16.52■□□□□ 0.23
LAMA1P25391 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LAMA1P25391 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.52■□□□□ 0.23
LAMA1P25391 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
LAMA1P25391 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LAMA1P25391 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
LAMA1P25391 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.52■□□□□ 0.23
LAMA1P25391 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LAMA1P25391 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LAMA1P25391 AC120498.9-201ENST00000339021 3867 ntBASIC16.52■□□□□ 0.23
LAMA1P25391 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.51■□□□□ 0.23
LAMA1P25391 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.51■□□□□ 0.23
LAMA1P25391 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.51■□□□□ 0.23
LAMA1P25391 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.51■□□□□ 0.23
LAMA1P25391 AC004840.1-201ENST00000636359 365 ntBASIC16.51■□□□□ 0.23
LAMA1P25391 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms