Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.04■□□□□ 0.16
CHMP24386 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CHMP24386 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CHMP24386 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CHMP24386 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CHMP24386 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CHMP24386 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.04■□□□□ 0.16
CHMP24386 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.04■□□□□ 0.16
CHMP24386 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.04■□□□□ 0.16
CHMP24386 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
CHMP24386 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.04■□□□□ 0.16
CHMP24386 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.04■□□□□ 0.16
CHMP24386 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.04■□□□□ 0.16
CHMP24386 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.04■□□□□ 0.16
CHMP24386 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.04■□□□□ 0.16
CHMP24386 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CHMP24386 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.04■□□□□ 0.16
CHMP24386 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.04■□□□□ 0.16
CHMP24386 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.04■□□□□ 0.16
CHMP24386 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
CHMP24386 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.04■□□□□ 0.16
CHMP24386 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CHMP24386 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 AC046185.3-201ENST00000623228 1824 ntBASIC16.03■□□□□ 0.16
CHMP24386 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CHMP24386 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CHMP24386 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CHMP24386 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CHMP24386 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.03■□□□□ 0.16
CHMP24386 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CHMP24386 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 SAPCD2P3-201ENST00000455031 850 ntBASIC16.03■□□□□ 0.16
CHMP24386 AC122714.2-201ENST00000502787 707 ntBASIC16.03■□□□□ 0.16
CHMP24386 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.03■□□□□ 0.16
CHMP24386 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CHMP24386 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.03■□□□□ 0.16
CHMP24386 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CHMP24386 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.03■□□□□ 0.16
CHMP24386 REXO1L6P-202ENST00000619970 1078 ntBASIC16.03■□□□□ 0.16
CHMP24386 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CHMP24386 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CHMP24386 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.03■□□□□ 0.16
CHMP24386 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CHMP24386 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHMP24386 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP24386 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.02■□□□□ 0.16
CHMP24386 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP24386 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP24386 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP24386 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.02■□□□□ 0.16
CHMP24386 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CHMP24386 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.02■□□□□ 0.16
CHMP24386 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
CHMP24386 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP24386 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP24386 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP24386 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.02■□□□□ 0.16
CHMP24386 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP24386 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHMP24386 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.02■□□□□ 0.16
CHMP24386 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms