Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.27■□□□□ 0.36
XPAP23025 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.27■□□□□ 0.36
XPAP23025 KRT18P3-201ENST00000451602 1288 ntBASIC17.27■□□□□ 0.36
XPAP23025 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.27■□□□□ 0.36
XPAP23025 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.27■□□□□ 0.36
XPAP23025 FAM197Y3-203ENST00000618346 717 ntBASIC17.27■□□□□ 0.36
XPAP23025 AC004790.2-201ENST00000623588 572 ntBASIC17.27■□□□□ 0.36
XPAP23025 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
XPAP23025 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.27■□□□□ 0.36
XPAP23025 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.27■□□□□ 0.36
XPAP23025 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
XPAP23025 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
XPAP23025 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
XPAP23025 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.27■□□□□ 0.35
XPAP23025 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
XPAP23025 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
XPAP23025 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
XPAP23025 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.27■□□□□ 0.35
XPAP23025 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
XPAP23025 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.27■□□□□ 0.35
XPAP23025 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
XPAP23025 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
XPAP23025 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
XPAP23025 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.27■□□□□ 0.35
XPAP23025 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
XPAP23025 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
XPAP23025 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.26■□□□□ 0.35
XPAP23025 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
XPAP23025 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.26■□□□□ 0.35
XPAP23025 PMS2P7-201ENST00000506558 1336 ntBASIC17.26■□□□□ 0.35
XPAP23025 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
XPAP23025 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
XPAP23025 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.26■□□□□ 0.35
XPAP23025 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
XPAP23025 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
XPAP23025 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.26■□□□□ 0.35
XPAP23025 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
XPAP23025 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.26■□□□□ 0.35
XPAP23025 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.26■□□□□ 0.35
XPAP23025 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XPAP23025 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.25■□□□□ 0.35
XPAP23025 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
XPAP23025 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
XPAP23025 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.25■□□□□ 0.35
XPAP23025 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
XPAP23025 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.25■□□□□ 0.35
XPAP23025 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
XPAP23025 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.25■□□□□ 0.35
XPAP23025 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.25■□□□□ 0.35
XPAP23025 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.25■□□□□ 0.35
XPAP23025 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.25■□□□□ 0.35
XPAP23025 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.25■□□□□ 0.35
XPAP23025 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
XPAP23025 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.25■□□□□ 0.35
XPAP23025 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.25■□□□□ 0.35
XPAP23025 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
XPAP23025 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.25■□□□□ 0.35
XPAP23025 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
XPAP23025 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
XPAP23025 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
XPAP23025 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XPAP23025 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms