Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LMNB1P20700 TEX28P1-201ENST00000613479 1221 ntBASIC20.56■□□□□ 0.88
LMNB1P20700 TEX28P2-201ENST00000617764 1221 ntBASIC20.56■□□□□ 0.88
LMNB1P20700 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.56■□□□□ 0.88
LMNB1P20700 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.56■□□□□ 0.88
LMNB1P20700 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMNB1P20700 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LMNB1P20700 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LMNB1P20700 AL391825.1-201ENST00000457671 1364 ntBASIC20.56■□□□□ 0.88
LMNB1P20700 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMNB1P20700 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LMNB1P20700 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.56■□□□□ 0.88
LMNB1P20700 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMNB1P20700 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMNB1P20700 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.56■□□□□ 0.88
LMNB1P20700 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.56■□□□□ 0.88
LMNB1P20700 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
LMNB1P20700 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LMNB1P20700 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LMNB1P20700 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.55■□□□□ 0.88
LMNB1P20700 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LMNB1P20700 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LMNB1P20700 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.55■□□□□ 0.88
LMNB1P20700 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.55■□□□□ 0.88
LMNB1P20700 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.55■□□□□ 0.88
LMNB1P20700 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LMNB1P20700 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.55■□□□□ 0.88
LMNB1P20700 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
LMNB1P20700 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LMNB1P20700 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LMNB1P20700 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.55■□□□□ 0.88
LMNB1P20700 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LMNB1P20700 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LMNB1P20700 AC087499.6-201ENST00000411576 835 ntBASIC20.55■□□□□ 0.88
LMNB1P20700 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
LMNB1P20700 SLC25A6P5-201ENST00000435663 894 ntBASIC20.55■□□□□ 0.88
LMNB1P20700 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.55■□□□□ 0.88
LMNB1P20700 AC105233.2-201ENST00000523697 349 ntBASIC20.55■□□□□ 0.88
LMNB1P20700 AF228730.5-201ENST00000530288 346 ntBASIC20.55■□□□□ 0.88
LMNB1P20700 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.55■□□□□ 0.88
LMNB1P20700 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
LMNB1P20700 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.55■□□□□ 0.88
LMNB1P20700 AL139327.4-201ENST00000612362 153 ntBASIC20.55■□□□□ 0.88
LMNB1P20700 AC004840.1-201ENST00000636359 365 ntBASIC20.55■□□□□ 0.88
LMNB1P20700 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LMNB1P20700 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LMNB1P20700 AL035456.1-201ENST00000456064 1369 ntBASIC20.55■□□□□ 0.88
LMNB1P20700 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LMNB1P20700 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
LMNB1P20700 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LMNB1P20700 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.54■□□□□ 0.88
LMNB1P20700 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.54■□□□□ 0.88
LMNB1P20700 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.54■□□□□ 0.88
LMNB1P20700 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.54■□□□□ 0.88
LMNB1P20700 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.54■□□□□ 0.88
LMNB1P20700 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LMNB1P20700 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
LMNB1P20700 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LMNB1P20700 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.54■□□□□ 0.88
LMNB1P20700 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.54■□□□□ 0.88
LMNB1P20700 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.54■□□□□ 0.88
LMNB1P20700 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LMNB1P20700 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LMNB1P20700 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.53■□□□□ 0.88
LMNB1P20700 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LMNB1P20700 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LMNB1P20700 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LMNB1P20700 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMNB1P20700 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMNB1P20700 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LMNB1P20700 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMNB1P20700 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMNB1P20700 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
LMNB1P20700 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.53■□□□□ 0.88
LMNB1P20700 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.53■□□□□ 0.88
LMNB1P20700 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMNB1P20700 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.53■□□□□ 0.88
LMNB1P20700 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LMNB1P20700 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.53■□□□□ 0.88
LMNB1P20700 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.53■□□□□ 0.88
LMNB1P20700 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.53■□□□□ 0.88
LMNB1P20700 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LMNB1P20700 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms