Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD58P19256 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD58P19256 AC026396.1-201ENST00000419388 421 ntBASIC18.38■□□□□ 0.53
CD58P19256 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.38■□□□□ 0.53
CD58P19256 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.38■□□□□ 0.53
CD58P19256 AC079776.4-201ENST00000511039 504 ntBASIC18.38■□□□□ 0.53
CD58P19256 AL662844.1-201ENST00000546340 181 ntBASIC18.38■□□□□ 0.53
CD58P19256 AP001005.1-201ENST00000571755 1248 ntBASIC18.38■□□□□ 0.53
CD58P19256 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CD58P19256 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.38■□□□□ 0.53
CD58P19256 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CD58P19256 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CD58P19256 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CD58P19256 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CD58P19256 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD58P19256 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CD58P19256 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
CD58P19256 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.38■□□□□ 0.53
CD58P19256 GPR89P-201ENST00000407924 1495 ntBASIC18.38■□□□□ 0.53
CD58P19256 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD58P19256 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.38■□□□□ 0.53
CD58P19256 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD58P19256 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.38■□□□□ 0.53
CD58P19256 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD58P19256 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.38■□□□□ 0.53
CD58P19256 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CD58P19256 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD58P19256 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD58P19256 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD58P19256 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CD58P19256 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD58P19256 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.37■□□□□ 0.53
CD58P19256 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD58P19256 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD58P19256 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD58P19256 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD58P19256 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.37■□□□□ 0.53
CD58P19256 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.37■□□□□ 0.53
CD58P19256 PTCHD3P3-201ENST00000403073 906 ntBASIC18.37■□□□□ 0.53
CD58P19256 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.37■□□□□ 0.53
CD58P19256 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.37■□□□□ 0.53
CD58P19256 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.37■□□□□ 0.53
CD58P19256 AC092910.1-201ENST00000482027 1129 ntBASIC18.37■□□□□ 0.53
CD58P19256 RNA5SP419-201ENST00000515908 135 ntBASIC18.37■□□□□ 0.53
CD58P19256 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.37■□□□□ 0.53
CD58P19256 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.37■□□□□ 0.53
CD58P19256 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.37■□□□□ 0.53
CD58P19256 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.37■□□□□ 0.53
CD58P19256 AC105339.3-201ENST00000560043 636 ntBASIC18.37■□□□□ 0.53
CD58P19256 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.37■□□□□ 0.53
CD58P19256 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CD58P19256 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.37■□□□□ 0.53
CD58P19256 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.37■□□□□ 0.53
CD58P19256 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CD58P19256 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CD58P19256 HLA-A-201ENST00000376802 1334 ntBASIC18.37■□□□□ 0.53
CD58P19256 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CD58P19256 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD58P19256 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD58P19256 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CD58P19256 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD58P19256 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CD58P19256 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CD58P19256 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CD58P19256 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.36■□□□□ 0.53
CD58P19256 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CD58P19256 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CD58P19256 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CD58P19256 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 AC073621.1-201ENST00000392730 636 ntBASIC18.36■□□□□ 0.53
CD58P19256 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 KRT18P27-201ENST00000427733 1299 ntBASIC18.36■□□□□ 0.53
CD58P19256 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
CD58P19256 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.36■□□□□ 0.53
CD58P19256 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.36■□□□□ 0.53
CD58P19256 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.36■□□□□ 0.53
CD58P19256 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.36■□□□□ 0.53
CD58P19256 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.36■□□□□ 0.53
CD58P19256 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.36■□□□□ 0.53
CD58P19256 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.36■□□□□ 0.53
CD58P19256 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.36■□□□□ 0.53
CD58P19256 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD58P19256 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD58P19256 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD58P19256 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CD58P19256 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms