Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NCK1P16333 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCK1P16333 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCK1P16333 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
NCK1P16333 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCK1P16333 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCK1P16333 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCK1P16333 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCK1P16333 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NCK1P16333 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCK1P16333 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCK1P16333 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.22■□□□□ 0.19
NCK1P16333 AC007967.3-201ENST00000434308 558 ntBASIC16.22■□□□□ 0.19
NCK1P16333 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.22■□□□□ 0.19
NCK1P16333 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.22■□□□□ 0.19
NCK1P16333 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.22■□□□□ 0.19
NCK1P16333 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.22■□□□□ 0.19
NCK1P16333 GPR32P1-201ENST00000601788 811 ntBASIC16.22■□□□□ 0.19
NCK1P16333 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCK1P16333 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NCK1P16333 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.22■□□□□ 0.19
NCK1P16333 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
NCK1P16333 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCK1P16333 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCK1P16333 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NCK1P16333 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCK1P16333 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NCK1P16333 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCK1P16333 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.21■□□□□ 0.19
NCK1P16333 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 FAM8A6P-201ENST00000407496 1135 ntBASIC16.21■□□□□ 0.19
NCK1P16333 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.21■□□□□ 0.19
NCK1P16333 SLC25A3P1-201ENST00000443844 931 ntBASIC16.21■□□□□ 0.19
NCK1P16333 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.21■□□□□ 0.19
NCK1P16333 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.21■□□□□ 0.19
NCK1P16333 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NCK1P16333 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.21■□□□□ 0.19
NCK1P16333 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.21■□□□□ 0.19
NCK1P16333 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 PKD1P5-201ENST00000532415 10291 ntBASIC16.21■□□□□ 0.19
NCK1P16333 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
NCK1P16333 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NCK1P16333 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NCK1P16333 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.21■□□□□ 0.19
NCK1P16333 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCK1P16333 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NCK1P16333 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NCK1P16333 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NCK1P16333 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
NCK1P16333 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.21■□□□□ 0.18
NCK1P16333 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.21■□□□□ 0.18
NCK1P16333 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
NCK1P16333 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.21■□□□□ 0.18
NCK1P16333 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NCK1P16333 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.2■□□□□ 0.18
NCK1P16333 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NCK1P16333 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NCK1P16333 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
NCK1P16333 FRMD8P1-201ENST00000440433 1524 ntBASIC16.2■□□□□ 0.18
NCK1P16333 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.2■□□□□ 0.18
NCK1P16333 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.2■□□□□ 0.18
NCK1P16333 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.2■□□□□ 0.18
NCK1P16333 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.2■□□□□ 0.18
NCK1P16333 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.2■□□□□ 0.18
NCK1P16333 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 MIR4497-201ENST00000583208 89 ntBASIC16.2■□□□□ 0.18
NCK1P16333 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.2■□□□□ 0.18
NCK1P16333 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.2■□□□□ 0.18
NCK1P16333 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NCK1P16333 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NCK1P16333 TSPY26P-202ENST00000565928 3884 ntBASIC16.2■□□□□ 0.18
NCK1P16333 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms