Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RARAP10276 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.98■□□□□ 0.47
RARAP10276 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.98■□□□□ 0.47
RARAP10276 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RARAP10276 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
RARAP10276 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.98■□□□□ 0.47
RARAP10276 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RARAP10276 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RARAP10276 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.98■□□□□ 0.47
RARAP10276 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RARAP10276 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RARAP10276 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RARAP10276 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RARAP10276 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RARAP10276 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RARAP10276 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RARAP10276 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RARAP10276 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RARAP10276 AP005117.1-201ENST00000584346 1413 ntBASIC17.98■□□□□ 0.47
RARAP10276 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RARAP10276 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
RARAP10276 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.97■□□□□ 0.47
RARAP10276 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RARAP10276 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RARAP10276 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
RARAP10276 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RARAP10276 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RARAP10276 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RARAP10276 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RARAP10276 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RARAP10276 AL732292.2-201ENST00000609649 430 ntBASIC17.97■□□□□ 0.47
RARAP10276 AC073592.4-201ENST00000623827 446 ntBASIC17.97■□□□□ 0.47
RARAP10276 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RARAP10276 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RARAP10276 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RARAP10276 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RARAP10276 AC079776.2-201ENST00000641154 1609 ntBASIC17.97■□□□□ 0.47
RARAP10276 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RARAP10276 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RARAP10276 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RARAP10276 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RARAP10276 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RARAP10276 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RARAP10276 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RARAP10276 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.96■□□□□ 0.47
RARAP10276 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RARAP10276 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RARAP10276 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RARAP10276 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RARAP10276 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RARAP10276 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.96■□□□□ 0.47
RARAP10276 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.96■□□□□ 0.47
RARAP10276 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.96■□□□□ 0.47
RARAP10276 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.96■□□□□ 0.47
RARAP10276 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.96■□□□□ 0.47
RARAP10276 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RARAP10276 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.96■□□□□ 0.47
RARAP10276 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RARAP10276 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.96■□□□□ 0.47
RARAP10276 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.96■□□□□ 0.47
RARAP10276 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RARAP10276 AC004817.3-201ENST00000602957 2129 ntBASIC17.96■□□□□ 0.47
RARAP10276 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RARAP10276 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RARAP10276 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RARAP10276 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.96■□□□□ 0.47
RARAP10276 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RARAP10276 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RARAP10276 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RARAP10276 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RARAP10276 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RARAP10276 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.95■□□□□ 0.46
RARAP10276 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RARAP10276 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.95■□□□□ 0.46
RARAP10276 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.95■□□□□ 0.46
RARAP10276 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
RARAP10276 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.95■□□□□ 0.46
RARAP10276 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.95■□□□□ 0.46
RARAP10276 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.95■□□□□ 0.46
RARAP10276 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RARAP10276 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.95■□□□□ 0.46
RARAP10276 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.95■□□□□ 0.46
RARAP10276 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RARAP10276 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms