Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 KRT18P28-201ENST00000453838 1332 ntBASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 AC129492.6-201ENST00000611383 1305 ntBASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 AC012317.2-201ENST00000623305 2251 ntBASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAB40ALP0C0E4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 FAM58CP-201ENST00000435741 640 ntBASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 AL031432.2-201ENST00000566714 459 ntBASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 AL928711.1-201ENST00000570165 459 ntBASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 AC068137.2-201ENST00000605408 478 ntBASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 LINC00304-203ENST00000565008 1864 ntBASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40ALP0C0E4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40ALP0C0E4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms