Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLTAP09496 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLTAP09496 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLTAP09496 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLTAP09496 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLTAP09496 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLTAP09496 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLTAP09496 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLTAP09496 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.72■□□□□ 0.59
CLTAP09496 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.72■□□□□ 0.59
CLTAP09496 IGHV3-65-201ENST00000523210 341 ntBASIC18.72■□□□□ 0.59
CLTAP09496 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.72■□□□□ 0.59
CLTAP09496 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.72■□□□□ 0.59
CLTAP09496 AC034105.1-201ENST00000563488 319 ntBASIC18.72■□□□□ 0.59
CLTAP09496 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.72■□□□□ 0.59
CLTAP09496 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CLTAP09496 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.72■□□□□ 0.59
CLTAP09496 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.72■□□□□ 0.59
CLTAP09496 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CLTAP09496 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CLTAP09496 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLTAP09496 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLTAP09496 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLTAP09496 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.72■□□□□ 0.59
CLTAP09496 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLTAP09496 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.72■□□□□ 0.59
CLTAP09496 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLTAP09496 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLTAP09496 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLTAP09496 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLTAP09496 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLTAP09496 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.71■□□□□ 0.59
CLTAP09496 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLTAP09496 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLTAP09496 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLTAP09496 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.71■□□□□ 0.59
CLTAP09496 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CLTAP09496 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.71■□□□□ 0.59
CLTAP09496 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.71■□□□□ 0.59
CLTAP09496 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLTAP09496 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.71■□□□□ 0.59
CLTAP09496 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLTAP09496 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CLTAP09496 MIR574-201ENST00000385209 96 ntBASIC18.71■□□□□ 0.59
CLTAP09496 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CLTAP09496 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLTAP09496 AC108751.1-201ENST00000490852 363 ntBASIC18.71■□□□□ 0.59
CLTAP09496 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLTAP09496 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLTAP09496 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLTAP09496 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.71■□□□□ 0.59
CLTAP09496 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.71■□□□□ 0.59
CLTAP09496 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLTAP09496 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLTAP09496 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLTAP09496 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.71■□□□□ 0.59
CLTAP09496 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.71■□□□□ 0.59
CLTAP09496 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.71■□□□□ 0.59
CLTAP09496 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.71■□□□□ 0.59
CLTAP09496 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
CLTAP09496 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CLTAP09496 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLTAP09496 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CLTAP09496 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CLTAP09496 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.7■□□□□ 0.58
CLTAP09496 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.7■□□□□ 0.58
CLTAP09496 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.7■□□□□ 0.58
CLTAP09496 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.7■□□□□ 0.58
CLTAP09496 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLTAP09496 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLTAP09496 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.7■□□□□ 0.58
CLTAP09496 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 TERC-201ENST00000602385 541 ntBASIC18.7■□□□□ 0.58
CLTAP09496 GGTLC5P-201ENST00000617623 998 ntBASIC18.7■□□□□ 0.58
CLTAP09496 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CLTAP09496 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.7■□□□□ 0.58
CLTAP09496 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.7■□□□□ 0.58
CLTAP09496 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.7■□□□□ 0.58
CLTAP09496 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.7■□□□□ 0.58
CLTAP09496 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms