Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP2P08253 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP2P08253 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP2P08253 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.18■□□□□ 0.34
MMP2P08253 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.18■□□□□ 0.34
MMP2P08253 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP2P08253 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP2P08253 AC009947.1-201ENST00000444350 727 ntBASIC17.18■□□□□ 0.34
MMP2P08253 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP2P08253 RNA5SP415-201ENST00000517246 115 ntBASIC17.18■□□□□ 0.34
MMP2P08253 UNC93B6-202ENST00000528242 690 ntBASIC17.18■□□□□ 0.34
MMP2P08253 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
MMP2P08253 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.18■□□□□ 0.34
MMP2P08253 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.18■□□□□ 0.34
MMP2P08253 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.18■□□□□ 0.34
MMP2P08253 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
MMP2P08253 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP2P08253 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MMP2P08253 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP2P08253 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
MMP2P08253 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP2P08253 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.18■□□□□ 0.34
MMP2P08253 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP2P08253 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP2P08253 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP2P08253 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
MMP2P08253 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.17■□□□□ 0.34
MMP2P08253 AL021920.2-201ENST00000624828 1351 ntBASIC17.17■□□□□ 0.34
MMP2P08253 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
MMP2P08253 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
MMP2P08253 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP2P08253 AC093909.1-201ENST00000504731 1122 ntBASIC17.17■□□□□ 0.34
MMP2P08253 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP2P08253 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
MMP2P08253 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.17■□□□□ 0.34
MMP2P08253 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.17■□□□□ 0.34
MMP2P08253 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.17■□□□□ 0.34
MMP2P08253 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.17■□□□□ 0.34
MMP2P08253 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.17■□□□□ 0.34
MMP2P08253 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.17■□□□□ 0.34
MMP2P08253 FLJ38576-201ENST00000623820 2459 ntBASIC17.17■□□□□ 0.34
MMP2P08253 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.17■□□□□ 0.34
MMP2P08253 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
MMP2P08253 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP2P08253 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
MMP2P08253 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MMP2P08253 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.17■□□□□ 0.34
MMP2P08253 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP2P08253 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP2P08253 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP2P08253 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 TOP3BP1-201ENST00000420768 1380 ntBASIC17.16■□□□□ 0.34
MMP2P08253 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
MMP2P08253 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MMP2P08253 AC108751.1-201ENST00000490852 363 ntBASIC17.16■□□□□ 0.34
MMP2P08253 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.16■□□□□ 0.34
MMP2P08253 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP2P08253 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP2P08253 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP2P08253 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP2P08253 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
MMP2P08253 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP2P08253 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP2P08253 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP2P08253 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP2P08253 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.15■□□□□ 0.34
MMP2P08253 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP2P08253 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP2P08253 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP2P08253 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms