Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SFTPBP07988 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.93□□□□□ -0.02
SFTPBP07988 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SFTPBP07988 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SFTPBP07988 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SFTPBP07988 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SFTPBP07988 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SFTPBP07988 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SFTPBP07988 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.93□□□□□ -0.02
SFTPBP07988 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SFTPBP07988 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SFTPBP07988 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SFTPBP07988 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SFTPBP07988 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.92□□□□□ -0.02
SFTPBP07988 AC097374.2-201ENST00000618617 1306 ntBASIC14.92□□□□□ -0.02
SFTPBP07988 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 AC016396.2-201ENST00000562575 1417 ntBASIC14.92□□□□□ -0.02
SFTPBP07988 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SFTPBP07988 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
SFTPBP07988 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SFTPBP07988 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SFTPBP07988 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SFTPBP07988 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
SFTPBP07988 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.92□□□□□ -0.02
SFTPBP07988 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.92□□□□□ -0.02
SFTPBP07988 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.92□□□□□ -0.02
SFTPBP07988 TPSP2-201ENST00000561760 610 ntBASIC14.92□□□□□ -0.02
SFTPBP07988 MIR3652-201ENST00000579335 131 ntBASIC14.92□□□□□ -0.02
SFTPBP07988 AC090616.6-201ENST00000582640 721 ntBASIC14.92□□□□□ -0.02
SFTPBP07988 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SFTPBP07988 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SFTPBP07988 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.92□□□□□ -0.02
SFTPBP07988 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SFTPBP07988 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
SFTPBP07988 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.92□□□□□ -0.02
SFTPBP07988 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.92□□□□□ -0.02
SFTPBP07988 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.92□□□□□ -0.02
SFTPBP07988 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SFTPBP07988 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.92□□□□□ -0.02
SFTPBP07988 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.91□□□□□ -0.02
SFTPBP07988 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.91□□□□□ -0.02
SFTPBP07988 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.91□□□□□ -0.02
SFTPBP07988 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 COX5BP2-201ENST00000392354 334 ntBASIC14.91□□□□□ -0.02
SFTPBP07988 TOB2P1-201ENST00000469761 992 ntBASIC14.91□□□□□ -0.02
SFTPBP07988 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SFTPBP07988 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.91□□□□□ -0.02
SFTPBP07988 AP000867.3-201ENST00000524675 377 ntBASIC14.91□□□□□ -0.02
SFTPBP07988 KRT126P-201ENST00000549467 1181 ntBASIC14.91□□□□□ -0.02
SFTPBP07988 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.91□□□□□ -0.02
SFTPBP07988 PRELID1P1-202ENST00000567272 903 ntBASIC14.91□□□□□ -0.02
SFTPBP07988 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SFTPBP07988 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.91□□□□□ -0.02
SFTPBP07988 AL139327.4-201ENST00000612362 153 ntBASIC14.91□□□□□ -0.02
SFTPBP07988 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
SFTPBP07988 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.91□□□□□ -0.02
SFTPBP07988 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SFTPBP07988 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SFTPBP07988 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SFTPBP07988 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms