Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RB1P06400 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.95■□□□□ 0.46
RB1P06400 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RB1P06400 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.95■□□□□ 0.46
RB1P06400 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.95■□□□□ 0.46
RB1P06400 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.95■□□□□ 0.46
RB1P06400 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.95■□□□□ 0.46
RB1P06400 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.95■□□□□ 0.46
RB1P06400 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RB1P06400 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RB1P06400 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RB1P06400 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RB1P06400 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.95■□□□□ 0.46
RB1P06400 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RB1P06400 AC020763.4-201ENST00000623414 4170 ntBASIC17.95■□□□□ 0.46
RB1P06400 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RB1P06400 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RB1P06400 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RB1P06400 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.95■□□□□ 0.46
RB1P06400 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RB1P06400 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RB1P06400 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RB1P06400 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.95■□□□□ 0.46
RB1P06400 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.94■□□□□ 0.46
RB1P06400 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RB1P06400 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.94■□□□□ 0.46
RB1P06400 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RB1P06400 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RB1P06400 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RB1P06400 AC016027.1-202ENST00000607927 1699 ntBASIC17.94■□□□□ 0.46
RB1P06400 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RB1P06400 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.94■□□□□ 0.46
RB1P06400 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RB1P06400 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RB1P06400 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RB1P06400 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.94■□□□□ 0.46
RB1P06400 AC007274.1-201ENST00000439805 662 ntBASIC17.94■□□□□ 0.46
RB1P06400 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.94■□□□□ 0.46
RB1P06400 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.94■□□□□ 0.46
RB1P06400 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.94■□□□□ 0.46
RB1P06400 AC105233.2-201ENST00000523697 349 ntBASIC17.94■□□□□ 0.46
RB1P06400 AF228730.5-201ENST00000530288 346 ntBASIC17.94■□□□□ 0.46
RB1P06400 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RB1P06400 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RB1P06400 RARRES2P9-201ENST00000565168 469 ntBASIC17.94■□□□□ 0.46
RB1P06400 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.94■□□□□ 0.46
RB1P06400 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RB1P06400 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RB1P06400 LINC00304-203ENST00000565008 1864 ntBASIC17.94■□□□□ 0.46
RB1P06400 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RB1P06400 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RB1P06400 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RB1P06400 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RB1P06400 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.94■□□□□ 0.46
RB1P06400 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
RB1P06400 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RB1P06400 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RB1P06400 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RB1P06400 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.94■□□□□ 0.46
RB1P06400 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RB1P06400 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RB1P06400 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 CU639417.3-201ENST00000624240 1404 ntBASIC17.93■□□□□ 0.46
RB1P06400 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.93■□□□□ 0.46
RB1P06400 SPTLC1P1-201ENST00000447199 261 ntBASIC17.93■□□□□ 0.46
RB1P06400 HLA-V-204ENST00000476601 1289 ntBASIC17.93■□□□□ 0.46
RB1P06400 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.93■□□□□ 0.46
RB1P06400 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.93■□□□□ 0.46
RB1P06400 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
RB1P06400 AC007967.4-201ENST00000614700 386 ntBASIC17.93■□□□□ 0.46
RB1P06400 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.93■□□□□ 0.46
RB1P06400 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.93■□□□□ 0.46
RB1P06400 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.93■□□□□ 0.46
RB1P06400 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.93■□□□□ 0.46
RB1P06400 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RB1P06400 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.93■□□□□ 0.46
RB1P06400 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RB1P06400 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RB1P06400 SLC22A20-204ENST00000530038 1673 ntBASIC17.93■□□□□ 0.46
RB1P06400 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RB1P06400 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.92■□□□□ 0.46
RB1P06400 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RB1P06400 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RB1P06400 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RB1P06400 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RB1P06400 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms