Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CD3DP04234 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CD3DP04234 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 AC012618.2-201ENST00000428058 849 ntBASIC14.55□□□□□ -0.08
CD3DP04234 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.55□□□□□ -0.08
CD3DP04234 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.55□□□□□ -0.08
CD3DP04234 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.55□□□□□ -0.08
CD3DP04234 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.55□□□□□ -0.08
CD3DP04234 FITM1-202ENST00000559294 800 ntBASIC14.55□□□□□ -0.08
CD3DP04234 AC233702.5-201ENST00000584107 538 ntBASIC14.55□□□□□ -0.08
CD3DP04234 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.55□□□□□ -0.08
CD3DP04234 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.55□□□□□ -0.08
CD3DP04234 AP000525.1-201ENST00000608286 694 ntBASIC14.55□□□□□ -0.08
CD3DP04234 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.55□□□□□ -0.08
CD3DP04234 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.55□□□□□ -0.08
CD3DP04234 DBET-201ENST00000630918 3363 ntBASIC14.55□□□□□ -0.08
CD3DP04234 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
CD3DP04234 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.55□□□□□ -0.08
CD3DP04234 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.55□□□□□ -0.08
CD3DP04234 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CD3DP04234 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD3DP04234 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 AL356309.3-201ENST00000624132 1934 ntBASIC14.54□□□□□ -0.08
CD3DP04234 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CD3DP04234 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 AL645728.1-201ENST00000366221 2101 ntBASIC14.54□□□□□ -0.08
CD3DP04234 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.54□□□□□ -0.08
CD3DP04234 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.54□□□□□ -0.08
CD3DP04234 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.54□□□□□ -0.08
CD3DP04234 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CD3DP04234 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.54□□□□□ -0.08
CD3DP04234 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 INGX-201ENST00000359239 846 ntBASIC14.54□□□□□ -0.08
CD3DP04234 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.54□□□□□ -0.08
CD3DP04234 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.54□□□□□ -0.08
CD3DP04234 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.54□□□□□ -0.08
CD3DP04234 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.54□□□□□ -0.08
CD3DP04234 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.54□□□□□ -0.08
CD3DP04234 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.54□□□□□ -0.08
CD3DP04234 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.54□□□□□ -0.08
CD3DP04234 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.54□□□□□ -0.08
CD3DP04234 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CD3DP04234 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.54□□□□□ -0.08
CD3DP04234 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.54□□□□□ -0.08
CD3DP04234 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD3DP04234 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD3DP04234 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD3DP04234 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CD3DP04234 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD3DP04234 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD3DP04234 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.53□□□□□ -0.08
CD3DP04234 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.53□□□□□ -0.08
CD3DP04234 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD3DP04234 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD3DP04234 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD3DP04234 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD3DP04234 FRMD8P1-201ENST00000440433 1524 ntBASIC14.53□□□□□ -0.08
CD3DP04234 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.53□□□□□ -0.08
CD3DP04234 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD3DP04234 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD3DP04234 TSPY14P-201ENST00000303979 915 ntBASIC14.53□□□□□ -0.08
CD3DP04234 COX5BP2-201ENST00000392354 334 ntBASIC14.53□□□□□ -0.08
CD3DP04234 IGHV3-52-201ENST00000519770 353 ntBASIC14.53□□□□□ -0.08
CD3DP04234 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.53□□□□□ -0.08
CD3DP04234 MIR4651-201ENST00000582622 73 ntBASIC14.53□□□□□ -0.08
CD3DP04234 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD3DP04234 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD3DP04234 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD3DP04234 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms