Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.5□□□□□ -0.25
TRGV3P03979 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.5□□□□□ -0.25
TRGV3P03979 TP73-AS1-207ENST00000624167 988 ntBASIC13.5□□□□□ -0.25
TRGV3P03979 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRGV3P03979 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.5□□□□□ -0.25
TRGV3P03979 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV3P03979 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV3P03979 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV3P03979 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRGV3P03979 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV3P03979 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV3P03979 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV3P03979 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.5□□□□□ -0.25
TRGV3P03979 AC080080.1-201ENST00000625121 2420 ntBASIC13.5□□□□□ -0.25
TRGV3P03979 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV3P03979 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV3P03979 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV3P03979 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.49□□□□□ -0.25
TRGV3P03979 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.49□□□□□ -0.25
TRGV3P03979 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.49□□□□□ -0.25
TRGV3P03979 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.49□□□□□ -0.25
TRGV3P03979 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 RPS2P28-201ENST00000314255 741 ntBASIC13.49□□□□□ -0.25
TRGV3P03979 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.49□□□□□ -0.25
TRGV3P03979 LINC00982-205ENST00000420957 435 ntBASIC13.49□□□□□ -0.25
TRGV3P03979 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.49□□□□□ -0.25
TRGV3P03979 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.49□□□□□ -0.25
TRGV3P03979 OR7E14P-202ENST00000530490 1290 ntBASIC13.49□□□□□ -0.25
TRGV3P03979 AL160237.2-201ENST00000556165 472 ntBASIC13.49□□□□□ -0.25
TRGV3P03979 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.49□□□□□ -0.25
TRGV3P03979 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.49□□□□□ -0.25
TRGV3P03979 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.49□□□□□ -0.25
TRGV3P03979 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.49□□□□□ -0.25
TRGV3P03979 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.49□□□□□ -0.25
TRGV3P03979 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRGV3P03979 AL589182.2-201ENST00000619332 1049 ntBASIC13.49□□□□□ -0.25
TRGV3P03979 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
TRGV3P03979 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 AC093525.9-201ENST00000624961 1746 ntBASIC13.49□□□□□ -0.25
TRGV3P03979 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRGV3P03979 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRGV3P03979 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRGV3P03979 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRGV3P03979 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV3P03979 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.49□□□□□ -0.25
TRGV3P03979 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRGV3P03979 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRGV3P03979 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.48□□□□□ -0.25
TRGV3P03979 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
TRGV3P03979 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.48□□□□□ -0.25
TRGV3P03979 AL645608.8-201ENST00000606034 2086 ntBASIC13.48□□□□□ -0.25
TRGV3P03979 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.48□□□□□ -0.25
TRGV3P03979 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.48□□□□□ -0.25
TRGV3P03979 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.48□□□□□ -0.25
TRGV3P03979 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.48□□□□□ -0.25
TRGV3P03979 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.48□□□□□ -0.25
TRGV3P03979 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRGV3P03979 KRT18P67-201ENST00000432816 1264 ntBASIC13.48□□□□□ -0.25
TRGV3P03979 RPS2P1-201ENST00000434010 821 ntBASIC13.48□□□□□ -0.25
TRGV3P03979 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRGV3P03979 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.48□□□□□ -0.25
TRGV3P03979 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.48□□□□□ -0.25
TRGV3P03979 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.48□□□□□ -0.25
TRGV3P03979 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.48□□□□□ -0.25
TRGV3P03979 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.48□□□□□ -0.25
TRGV3P03979 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.48□□□□□ -0.25
TRGV3P03979 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.48□□□□□ -0.25
TRGV3P03979 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.48□□□□□ -0.25
TRGV3P03979 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRGV3P03979 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TRGV3P03979 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRGV3P03979 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.48□□□□□ -0.25
TRGV3P03979 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms