Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.32■□□□□ 0.04
APOA1P02647 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
APOA1P02647 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
APOA1P02647 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.32■□□□□ 0.04
APOA1P02647 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.32■□□□□ 0.04
APOA1P02647 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.32■□□□□ 0.04
APOA1P02647 MIR6786-201ENST00000616843 113 ntBASIC15.32■□□□□ 0.04
APOA1P02647 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOA1P02647 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOA1P02647 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
APOA1P02647 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APOA1P02647 AC078925.2-201ENST00000624013 1973 ntBASIC15.32■□□□□ 0.04
APOA1P02647 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
APOA1P02647 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOA1P02647 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOA1P02647 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOA1P02647 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.32■□□□□ 0.04
APOA1P02647 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOA1P02647 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOA1P02647 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APOA1P02647 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOA1P02647 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOA1P02647 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOA1P02647 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.32■□□□□ 0.04
APOA1P02647 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOA1P02647 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
APOA1P02647 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.31■□□□□ 0.04
APOA1P02647 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APOA1P02647 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
APOA1P02647 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOA1P02647 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.31■□□□□ 0.04
APOA1P02647 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
APOA1P02647 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOA1P02647 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOA1P02647 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
APOA1P02647 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.31■□□□□ 0.04
APOA1P02647 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.31■□□□□ 0.04
APOA1P02647 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOA1P02647 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
APOA1P02647 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
APOA1P02647 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.31■□□□□ 0.04
APOA1P02647 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
APOA1P02647 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOA1P02647 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.31■□□□□ 0.04
APOA1P02647 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.31■□□□□ 0.04
APOA1P02647 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOA1P02647 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
APOA1P02647 AL353807.1-201ENST00000427475 662 ntBASIC15.31■□□□□ 0.04
APOA1P02647 B3GAT3P1-201ENST00000471720 806 ntBASIC15.31■□□□□ 0.04
APOA1P02647 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.31■□□□□ 0.04
APOA1P02647 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.31■□□□□ 0.04
APOA1P02647 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
APOA1P02647 AC096733.2-201ENST00000609937 1394 ntBASIC15.31■□□□□ 0.04
APOA1P02647 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
APOA1P02647 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APOA1P02647 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.31■□□□□ 0.04
APOA1P02647 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOA1P02647 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOA1P02647 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APOA1P02647 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOA1P02647 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
APOA1P02647 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOA1P02647 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.31■□□□□ 0.04
APOA1P02647 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.31■□□□□ 0.04
APOA1P02647 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOA1P02647 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
APOA1P02647 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.3■□□□□ 0.04
APOA1P02647 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
APOA1P02647 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
APOA1P02647 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
APOA1P02647 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 AC133681.1-201ENST00000465482 601 ntBASIC15.3■□□□□ 0.04
APOA1P02647 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
APOA1P02647 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.3■□□□□ 0.04
APOA1P02647 CA15P1-201ENST00000481698 905 ntBASIC15.3■□□□□ 0.04
APOA1P02647 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.3■□□□□ 0.04
APOA1P02647 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 RARRES2P6-201ENST00000567333 442 ntBASIC15.3■□□□□ 0.04
APOA1P02647 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.3■□□□□ 0.04
APOA1P02647 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.3■□□□□ 0.04
APOA1P02647 AC110285.5-201ENST00000611501 352 ntBASIC15.3■□□□□ 0.04
APOA1P02647 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.3■□□□□ 0.04
APOA1P02647 CR392000.1-201ENST00000624770 1228 ntBASIC15.3■□□□□ 0.04
APOA1P02647 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.3■□□□□ 0.04
APOA1P02647 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.3■□□□□ 0.04
APOA1P02647 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOA1P02647 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms