Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
IFNA1P01562 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
IFNA1P01562 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.23
IFNA1P01562 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
IFNA1P01562 AC092364.2-201ENST00000596710 2692 ntBASIC13.58□□□□□ -0.23
IFNA1P01562 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
IFNA1P01562 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.58□□□□□ -0.23
IFNA1P01562 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 KRT16P1-201ENST00000399124 1418 ntBASIC13.58□□□□□ -0.24
IFNA1P01562 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.58□□□□□ -0.24
IFNA1P01562 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
IFNA1P01562 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
IFNA1P01562 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.58□□□□□ -0.24
IFNA1P01562 AC126177.1-201ENST00000547829 2218 ntBASIC13.58□□□□□ -0.24
IFNA1P01562 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
IFNA1P01562 MIR663A-201ENST00000385250 93 ntBASIC13.58□□□□□ -0.24
IFNA1P01562 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.58□□□□□ -0.24
IFNA1P01562 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.58□□□□□ -0.24
IFNA1P01562 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.58□□□□□ -0.24
IFNA1P01562 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
IFNA1P01562 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.58□□□□□ -0.24
IFNA1P01562 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.58□□□□□ -0.24
IFNA1P01562 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.58□□□□□ -0.24
IFNA1P01562 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.58□□□□□ -0.24
IFNA1P01562 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.58□□□□□ -0.24
IFNA1P01562 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
IFNA1P01562 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.58□□□□□ -0.24
IFNA1P01562 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFNA1P01562 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.58□□□□□ -0.24
IFNA1P01562 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.58□□□□□ -0.24
IFNA1P01562 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.58□□□□□ -0.24
IFNA1P01562 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
IFNA1P01562 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.58□□□□□ -0.24
IFNA1P01562 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.58□□□□□ -0.24
IFNA1P01562 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
IFNA1P01562 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.58□□□□□ -0.24
IFNA1P01562 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.57□□□□□ -0.24
IFNA1P01562 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 AC126335.2-201ENST00000623362 4637 ntBASIC13.57□□□□□ -0.24
IFNA1P01562 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
IFNA1P01562 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
IFNA1P01562 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.57□□□□□ -0.24
IFNA1P01562 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
IFNA1P01562 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
IFNA1P01562 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.57□□□□□ -0.24
IFNA1P01562 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.57□□□□□ -0.24
IFNA1P01562 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.57□□□□□ -0.24
IFNA1P01562 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.57□□□□□ -0.24
IFNA1P01562 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.57□□□□□ -0.24
IFNA1P01562 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
IFNA1P01562 AC130371.2-201ENST00000619443 611 ntBASIC13.57□□□□□ -0.24
IFNA1P01562 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.57□□□□□ -0.24
IFNA1P01562 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.57□□□□□ -0.24
IFNA1P01562 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 DBET-201ENST00000630918 3363 ntBASIC13.57□□□□□ -0.24
IFNA1P01562 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
IFNA1P01562 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.57□□□□□ -0.24
IFNA1P01562 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.57□□□□□ -0.24
IFNA1P01562 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.57□□□□□ -0.24
IFNA1P01562 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
IFNA1P01562 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IFNA1P01562 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
IFNA1P01562 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IFNA1P01562 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms