Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
TIMP1P01033 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.28■□□□□ 0.52
TIMP1P01033 FOXO1B-201ENST00000504678 1527 ntBASIC18.28■□□□□ 0.52
TIMP1P01033 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.28■□□□□ 0.52
TIMP1P01033 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.28■□□□□ 0.52
TIMP1P01033 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP1P01033 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP1P01033 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.28■□□□□ 0.52
TIMP1P01033 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP1P01033 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TIMP1P01033 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP1P01033 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TIMP1P01033 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TIMP1P01033 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.28■□□□□ 0.52
TIMP1P01033 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.28■□□□□ 0.52
TIMP1P01033 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TIMP1P01033 AC079776.1-201ENST00000401540 1152 ntBASIC18.28■□□□□ 0.52
TIMP1P01033 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP1P01033 MIR1909-201ENST00000411312 80 ntBASIC18.28■□□□□ 0.52
TIMP1P01033 AC087499.6-201ENST00000411576 835 ntBASIC18.28■□□□□ 0.52
TIMP1P01033 MTND6P24-201ENST00000440466 518 ntBASIC18.28■□□□□ 0.52
TIMP1P01033 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.28■□□□□ 0.52
TIMP1P01033 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.28■□□□□ 0.52
TIMP1P01033 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.28■□□□□ 0.52
TIMP1P01033 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.28■□□□□ 0.52
TIMP1P01033 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.28■□□□□ 0.52
TIMP1P01033 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.28■□□□□ 0.52
TIMP1P01033 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TIMP1P01033 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.28■□□□□ 0.52
TIMP1P01033 AC132938.2-201ENST00000579188 680 ntBASIC18.28■□□□□ 0.52
TIMP1P01033 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.28■□□□□ 0.52
TIMP1P01033 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.28■□□□□ 0.52
TIMP1P01033 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.28■□□□□ 0.52
TIMP1P01033 RN7SL828P-201ENST00000607615 303 ntBASIC18.28■□□□□ 0.52
TIMP1P01033 MIR6805-201ENST00000615055 62 ntBASIC18.28■□□□□ 0.52
TIMP1P01033 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.28■□□□□ 0.52
TIMP1P01033 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.28■□□□□ 0.52
TIMP1P01033 AL591163.1-201ENST00000641757 987 ntBASIC18.28■□□□□ 0.52
TIMP1P01033 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.28■□□□□ 0.52
TIMP1P01033 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP1P01033 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP1P01033 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP1P01033 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.28■□□□□ 0.52
TIMP1P01033 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP1P01033 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TIMP1P01033 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP1P01033 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP1P01033 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP1P01033 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TIMP1P01033 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TIMP1P01033 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.27■□□□□ 0.52
TIMP1P01033 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TIMP1P01033 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.27■□□□□ 0.52
TIMP1P01033 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.27■□□□□ 0.52
TIMP1P01033 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.27■□□□□ 0.52
TIMP1P01033 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.27■□□□□ 0.52
TIMP1P01033 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TIMP1P01033 GNAQP1-201ENST00000444815 1067 ntBASIC18.27■□□□□ 0.52
TIMP1P01033 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.27■□□□□ 0.52
TIMP1P01033 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TIMP1P01033 AC011495.1-201ENST00000498085 584 ntBASIC18.27■□□□□ 0.52
TIMP1P01033 AC135586.1-201ENST00000539323 574 ntBASIC18.27■□□□□ 0.52
TIMP1P01033 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TIMP1P01033 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.27■□□□□ 0.52
TIMP1P01033 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TIMP1P01033 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TIMP1P01033 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TIMP1P01033 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TIMP1P01033 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TIMP1P01033 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.27■□□□□ 0.51
TIMP1P01033 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TIMP1P01033 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
TIMP1P01033 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TIMP1P01033 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
TIMP1P01033 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TIMP1P01033 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIMP1P01033 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.26■□□□□ 0.51
TIMP1P01033 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.26■□□□□ 0.51
TIMP1P01033 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TIMP1P01033 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIMP1P01033 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TIMP1P01033 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TIMP1P01033 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.26■□□□□ 0.51
TIMP1P01033 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIMP1P01033 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TIMP1P01033 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.26■□□□□ 0.51
TIMP1P01033 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIMP1P01033 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.26■□□□□ 0.51
TIMP1P01033 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.26■□□□□ 0.51
TIMP1P01033 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TIMP1P01033 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.26■□□□□ 0.51
TIMP1P01033 AC106886.1-201ENST00000568660 600 ntBASIC18.26■□□□□ 0.51
TIMP1P01033 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.26■□□□□ 0.51
TIMP1P01033 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.26■□□□□ 0.51
TIMP1P01033 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIMP1P01033 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
TIMP1P01033 LINC00896-202ENST00000609602 2128 ntBASIC18.26■□□□□ 0.51
TIMP1P01033 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TIMP1P01033 LINC00895-201ENST00000629028 1637 ntBASIC18.26■□□□□ 0.51
TIMP1P01033 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms