Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTN3O95197 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTN3O95197 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RTN3O95197 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN3O95197 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN3O95197 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RTN3O95197 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RTN3O95197 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN3O95197 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RTN3O95197 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.04■□□□□ 0.48
RTN3O95197 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RTN3O95197 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN3O95197 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.04■□□□□ 0.48
RTN3O95197 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN3O95197 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.04■□□□□ 0.48
RTN3O95197 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.04■□□□□ 0.48
RTN3O95197 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN3O95197 PAWRP1-201ENST00000451083 565 ntBASIC18.04■□□□□ 0.48
RTN3O95197 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.04■□□□□ 0.48
RTN3O95197 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN3O95197 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN3O95197 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RTN3O95197 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN3O95197 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN3O95197 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN3O95197 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN3O95197 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.03■□□□□ 0.48
RTN3O95197 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RTN3O95197 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.03■□□□□ 0.48
RTN3O95197 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
RTN3O95197 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RTN3O95197 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
RTN3O95197 KRT18P13-201ENST00000400056 1290 ntBASIC18.03■□□□□ 0.48
RTN3O95197 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RTN3O95197 BX842568.4-201ENST00000421222 227 ntBASIC18.03■□□□□ 0.48
RTN3O95197 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.03■□□□□ 0.48
RTN3O95197 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.03■□□□□ 0.48
RTN3O95197 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.03■□□□□ 0.48
RTN3O95197 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.03■□□□□ 0.48
RTN3O95197 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.03■□□□□ 0.48
RTN3O95197 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RTN3O95197 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RTN3O95197 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RTN3O95197 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.03■□□□□ 0.48
RTN3O95197 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTN3O95197 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
RTN3O95197 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.03■□□□□ 0.48
RTN3O95197 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN3O95197 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RTN3O95197 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN3O95197 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN3O95197 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RTN3O95197 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN3O95197 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.02■□□□□ 0.48
RTN3O95197 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN3O95197 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN3O95197 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN3O95197 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTN3O95197 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN3O95197 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN3O95197 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTN3O95197 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RTN3O95197 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN3O95197 AC092865.5-201ENST00000545435 363 ntBASIC18.02■□□□□ 0.48
RTN3O95197 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.02■□□□□ 0.48
RTN3O95197 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.02■□□□□ 0.48
RTN3O95197 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.02■□□□□ 0.48
RTN3O95197 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.02■□□□□ 0.48
RTN3O95197 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN3O95197 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN3O95197 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RTN3O95197 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN3O95197 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RTN3O95197 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN3O95197 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
RTN3O95197 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.02■□□□□ 0.47
RTN3O95197 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN3O95197 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.01■□□□□ 0.47
RTN3O95197 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RTN3O95197 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN3O95197 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN3O95197 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN3O95197 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN3O95197 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN3O95197 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RTN3O95197 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms