Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDRT1O95170 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CDRT1O95170 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDRT1O95170 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDRT1O95170 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.32■□□□□ 0.04
CDRT1O95170 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.32■□□□□ 0.04
CDRT1O95170 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
CDRT1O95170 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.32■□□□□ 0.04
CDRT1O95170 ECEL1P2-202ENST00000465689 757 ntBASIC15.32■□□□□ 0.04
CDRT1O95170 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.32■□□□□ 0.04
CDRT1O95170 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CDRT1O95170 NAPSB-206ENST00000562112 1266 ntBASIC15.32■□□□□ 0.04
CDRT1O95170 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDRT1O95170 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.32■□□□□ 0.04
CDRT1O95170 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDRT1O95170 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.32■□□□□ 0.04
CDRT1O95170 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CDRT1O95170 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.32■□□□□ 0.04
CDRT1O95170 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.32■□□□□ 0.04
CDRT1O95170 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.32■□□□□ 0.04
CDRT1O95170 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CDRT1O95170 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.32■□□□□ 0.04
CDRT1O95170 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDRT1O95170 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.31■□□□□ 0.04
CDRT1O95170 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.31■□□□□ 0.04
CDRT1O95170 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.31■□□□□ 0.04
CDRT1O95170 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.31■□□□□ 0.04
CDRT1O95170 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.31■□□□□ 0.04
CDRT1O95170 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDRT1O95170 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.31■□□□□ 0.04
CDRT1O95170 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDRT1O95170 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CDRT1O95170 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.31■□□□□ 0.04
CDRT1O95170 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.31■□□□□ 0.04
CDRT1O95170 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.31■□□□□ 0.04
CDRT1O95170 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
CDRT1O95170 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.31■□□□□ 0.04
CDRT1O95170 AL157888.1-201ENST00000631930 593 ntBASIC15.31■□□□□ 0.04
CDRT1O95170 AP006294.2-201ENST00000641667 209 ntBASIC15.31■□□□□ 0.04
CDRT1O95170 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.31■□□□□ 0.04
CDRT1O95170 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.31■□□□□ 0.04
CDRT1O95170 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.31■□□□□ 0.04
CDRT1O95170 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDRT1O95170 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDRT1O95170 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.3■□□□□ 0.04
CDRT1O95170 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.3■□□□□ 0.04
CDRT1O95170 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.3■□□□□ 0.04
CDRT1O95170 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.3■□□□□ 0.04
CDRT1O95170 KRT18P65-201ENST00000439811 1286 ntBASIC15.3■□□□□ 0.04
CDRT1O95170 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDRT1O95170 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.3■□□□□ 0.04
CDRT1O95170 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.3■□□□□ 0.04
CDRT1O95170 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.3■□□□□ 0.04
CDRT1O95170 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms