Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ALX3O95076 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ALX3O95076 MIR662-201ENST00000384847 95 ntBASIC15.2■□□□□ 0.02
ALX3O95076 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ALX3O95076 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.2■□□□□ 0.02
ALX3O95076 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.2■□□□□ 0.02
ALX3O95076 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ALX3O95076 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ALX3O95076 AL441883.1-201ENST00000566170 1045 ntBASIC15.2■□□□□ 0.02
ALX3O95076 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ALX3O95076 AL121894.2-201ENST00000602977 491 ntBASIC15.2■□□□□ 0.02
ALX3O95076 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.2■□□□□ 0.02
ALX3O95076 AC005363.2-201ENST00000618631 242 ntBASIC15.2■□□□□ 0.02
ALX3O95076 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.2■□□□□ 0.02
ALX3O95076 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ALX3O95076 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ALX3O95076 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.2■□□□□ 0.02
ALX3O95076 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.2■□□□□ 0.02
ALX3O95076 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ALX3O95076 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ALX3O95076 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ALX3O95076 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
ALX3O95076 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ALX3O95076 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
ALX3O95076 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.2■□□□□ 0.02
ALX3O95076 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ALX3O95076 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.2■□□□□ 0.02
ALX3O95076 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ALX3O95076 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.19■□□□□ 0.02
ALX3O95076 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 CYP2T1P-202ENST00000641596 2535 ntBASIC15.19■□□□□ 0.02
ALX3O95076 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ALX3O95076 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
ALX3O95076 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ALX3O95076 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ALX3O95076 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.19■□□□□ 0.02
ALX3O95076 LINC01311-201ENST00000565162 1445 ntBASIC15.19■□□□□ 0.02
ALX3O95076 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
ALX3O95076 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.19■□□□□ 0.02
ALX3O95076 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.19■□□□□ 0.02
ALX3O95076 LIN28AP1-201ENST00000429574 405 ntBASIC15.19■□□□□ 0.02
ALX3O95076 BX664615.1-201ENST00000443558 458 ntBASIC15.19■□□□□ 0.02
ALX3O95076 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.19■□□□□ 0.02
ALX3O95076 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.19■□□□□ 0.02
ALX3O95076 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
ALX3O95076 AC087388.1-201ENST00000571370 1112 ntBASIC15.19■□□□□ 0.02
ALX3O95076 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.19■□□□□ 0.02
ALX3O95076 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.19■□□□□ 0.02
ALX3O95076 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.19■□□□□ 0.02
ALX3O95076 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 AC126177.1-201ENST00000547829 2218 ntBASIC15.19■□□□□ 0.02
ALX3O95076 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ALX3O95076 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ALX3O95076 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ALX3O95076 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.18■□□□□ 0.02
ALX3O95076 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.18■□□□□ 0.02
ALX3O95076 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ALX3O95076 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
ALX3O95076 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 MTCL1P1-201ENST00000446207 792 ntBASIC15.18■□□□□ 0.02
ALX3O95076 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.18■□□□□ 0.02
ALX3O95076 AC068472.1-201ENST00000474589 881 ntBASIC15.18■□□□□ 0.02
ALX3O95076 AC002558.1-201ENST00000488906 803 ntBASIC15.18■□□□□ 0.02
ALX3O95076 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.18■□□□□ 0.02
ALX3O95076 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.18■□□□□ 0.02
ALX3O95076 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.18■□□□□ 0.02
ALX3O95076 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.18■□□□□ 0.02
ALX3O95076 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 AL353692.3-201ENST00000407031 1396 ntBASIC15.18■□□□□ 0.02
ALX3O95076 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
ALX3O95076 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
ALX3O95076 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms