Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.36■□□□□ 0.37
USP1O94782 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
USP1O94782 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.36■□□□□ 0.37
USP1O94782 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.36■□□□□ 0.37
USP1O94782 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.36■□□□□ 0.37
USP1O94782 AC096582.2-201ENST00000510860 516 ntBASIC17.36■□□□□ 0.37
USP1O94782 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.36■□□□□ 0.37
USP1O94782 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
USP1O94782 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
USP1O94782 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 AC069148.1-201ENST00000608741 768 ntBASIC17.36■□□□□ 0.37
USP1O94782 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.36■□□□□ 0.37
USP1O94782 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.36■□□□□ 0.37
USP1O94782 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
USP1O94782 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.36■□□□□ 0.37
USP1O94782 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.36■□□□□ 0.37
USP1O94782 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.36■□□□□ 0.37
USP1O94782 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.36■□□□□ 0.37
USP1O94782 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
USP1O94782 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
USP1O94782 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
USP1O94782 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 OR6D1P-203ENST00000641209 4860 ntBASIC17.35■□□□□ 0.37
USP1O94782 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
USP1O94782 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.35■□□□□ 0.37
USP1O94782 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 FLJ38576-201ENST00000623820 2459 ntBASIC17.35■□□□□ 0.37
USP1O94782 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 RCN1P2-201ENST00000398357 915 ntBASIC17.35■□□□□ 0.37
USP1O94782 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
USP1O94782 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
USP1O94782 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
USP1O94782 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.35■□□□□ 0.37
USP1O94782 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.35■□□□□ 0.37
USP1O94782 LINC00265-3P-201ENST00000447588 903 ntBASIC17.35■□□□□ 0.37
USP1O94782 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.35■□□□□ 0.37
USP1O94782 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.35■□□□□ 0.37
USP1O94782 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.35■□□□□ 0.37
USP1O94782 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.35■□□□□ 0.37
USP1O94782 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
USP1O94782 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.35■□□□□ 0.37
USP1O94782 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.35■□□□□ 0.37
USP1O94782 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.35■□□□□ 0.37
USP1O94782 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
USP1O94782 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.35■□□□□ 0.37
USP1O94782 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
USP1O94782 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP1O94782 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
USP1O94782 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP1O94782 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP1O94782 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP1O94782 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP1O94782 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP1O94782 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP1O94782 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP1O94782 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP1O94782 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.34■□□□□ 0.37
USP1O94782 GPR89P-201ENST00000407924 1495 ntBASIC17.34■□□□□ 0.37
USP1O94782 POM121L3P-201ENST00000419331 1163 ntBASIC17.34■□□□□ 0.37
USP1O94782 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.34■□□□□ 0.37
USP1O94782 FRMD8P1-201ENST00000440433 1524 ntBASIC17.34■□□□□ 0.37
USP1O94782 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP1O94782 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP1O94782 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.34■□□□□ 0.37
USP1O94782 PCDHA14-201ENST00000506751 2298 ntBASIC17.34■□□□□ 0.37
USP1O94782 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.34■□□□□ 0.37
USP1O94782 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
USP1O94782 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP1O94782 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
USP1O94782 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP1O94782 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP1O94782 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.34■□□□□ 0.37
USP1O94782 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms