Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.67■□□□□ 0.26
CNOT3O75175 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CNOT3O75175 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CNOT3O75175 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
CNOT3O75175 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT3O75175 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT3O75175 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CNOT3O75175 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CNOT3O75175 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.67■□□□□ 0.26
CNOT3O75175 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT3O75175 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT3O75175 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT3O75175 NKAPP1-205ENST00000585790 367 ntBASIC16.67■□□□□ 0.26
CNOT3O75175 AC025062.2-201ENST00000605477 670 ntBASIC16.67■□□□□ 0.26
CNOT3O75175 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CNOT3O75175 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CNOT3O75175 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT3O75175 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT3O75175 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.66■□□□□ 0.26
CNOT3O75175 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CNOT3O75175 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.66■□□□□ 0.26
CNOT3O75175 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT3O75175 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.66■□□□□ 0.26
CNOT3O75175 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT3O75175 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT3O75175 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT3O75175 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.66■□□□□ 0.26
CNOT3O75175 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.66■□□□□ 0.26
CNOT3O75175 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT3O75175 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT3O75175 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT3O75175 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.66■□□□□ 0.26
CNOT3O75175 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CNOT3O75175 RPS2P1-201ENST00000434010 821 ntBASIC16.66■□□□□ 0.26
CNOT3O75175 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.66■□□□□ 0.26
CNOT3O75175 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CNOT3O75175 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.66■□□□□ 0.26
CNOT3O75175 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
CNOT3O75175 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.66■□□□□ 0.26
CNOT3O75175 AF228730.7-201ENST00000641842 219 ntBASIC16.66■□□□□ 0.26
CNOT3O75175 PKD1P5-201ENST00000532415 10291 ntBASIC16.66■□□□□ 0.26
CNOT3O75175 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT3O75175 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT3O75175 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT3O75175 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT3O75175 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CNOT3O75175 AC022898.2-201ENST00000616822 1312 ntBASIC16.66■□□□□ 0.26
CNOT3O75175 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.66■□□□□ 0.26
CNOT3O75175 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT3O75175 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.66■□□□□ 0.26
CNOT3O75175 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CNOT3O75175 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CNOT3O75175 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNOT3O75175 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CNOT3O75175 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT3O75175 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CNOT3O75175 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT3O75175 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT3O75175 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT3O75175 PMPCAP1-201ENST00000508114 1576 ntBASIC16.65■□□□□ 0.26
CNOT3O75175 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT3O75175 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT3O75175 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT3O75175 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT3O75175 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT3O75175 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CNOT3O75175 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CNOT3O75175 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CNOT3O75175 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.65■□□□□ 0.26
CNOT3O75175 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT3O75175 AC122714.2-201ENST00000502787 707 ntBASIC16.65■□□□□ 0.26
CNOT3O75175 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.65■□□□□ 0.26
CNOT3O75175 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT3O75175 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.65■□□□□ 0.26
CNOT3O75175 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CNOT3O75175 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.65■□□□□ 0.26
CNOT3O75175 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.65■□□□□ 0.26
CNOT3O75175 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.65■□□□□ 0.26
CNOT3O75175 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CNOT3O75175 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT3O75175 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CNOT3O75175 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNOT3O75175 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms