Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE3O75131 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE3O75131 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE3O75131 AC018695.7-201ENST00000624587 2492 ntBASIC16.48■□□□□ 0.23
CPNE3O75131 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CPNE3O75131 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE3O75131 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE3O75131 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE3O75131 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CPNE3O75131 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.47■□□□□ 0.23
CPNE3O75131 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.47■□□□□ 0.23
CPNE3O75131 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CPNE3O75131 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
CPNE3O75131 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CPNE3O75131 AC004832.2-201ENST00000426397 482 ntBASIC16.47■□□□□ 0.23
CPNE3O75131 GPX1P2-201ENST00000429271 606 ntBASIC16.47■□□□□ 0.23
CPNE3O75131 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.47■□□□□ 0.23
CPNE3O75131 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CPNE3O75131 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.47■□□□□ 0.23
CPNE3O75131 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.47■□□□□ 0.23
CPNE3O75131 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.47■□□□□ 0.23
CPNE3O75131 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.47■□□□□ 0.23
CPNE3O75131 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.47■□□□□ 0.23
CPNE3O75131 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CPNE3O75131 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.47■□□□□ 0.23
CPNE3O75131 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.47■□□□□ 0.23
CPNE3O75131 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.47■□□□□ 0.23
CPNE3O75131 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CPNE3O75131 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.47■□□□□ 0.23
CPNE3O75131 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE3O75131 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CPNE3O75131 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.46■□□□□ 0.23
CPNE3O75131 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.46■□□□□ 0.23
CPNE3O75131 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.46■□□□□ 0.23
CPNE3O75131 LINC00982-205ENST00000420957 435 ntBASIC16.46■□□□□ 0.23
CPNE3O75131 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.46■□□□□ 0.23
CPNE3O75131 PRSS29P-201ENST00000440800 595 ntBASIC16.46■□□□□ 0.23
CPNE3O75131 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.46■□□□□ 0.23
CPNE3O75131 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE3O75131 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE3O75131 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE3O75131 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.46■□□□□ 0.23
CPNE3O75131 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.46■□□□□ 0.23
CPNE3O75131 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CPNE3O75131 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CPNE3O75131 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.46■□□□□ 0.23
CPNE3O75131 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE3O75131 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms