Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF11O60813 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF11O60813 TOP3BP1-201ENST00000420768 1380 ntBASIC17.31■□□□□ 0.36
PRAMEF11O60813 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF11O60813 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF11O60813 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF11O60813 HCG4B-203ENST00000450128 991 ntBASIC17.31■□□□□ 0.36
PRAMEF11O60813 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF11O60813 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF11O60813 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF11O60813 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF11O60813 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF11O60813 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF11O60813 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF11O60813 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF11O60813 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF11O60813 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF11O60813 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF11O60813 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF11O60813 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF11O60813 IGLL3P-201ENST00000412472 434 ntBASIC17.3■□□□□ 0.36
PRAMEF11O60813 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF11O60813 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF11O60813 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF11O60813 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.3■□□□□ 0.36
PRAMEF11O60813 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF11O60813 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PRAMEF11O60813 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PRAMEF11O60813 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF11O60813 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.29■□□□□ 0.36
PRAMEF11O60813 AL121761.2-201ENST00000598007 1648 ntBASIC17.29■□□□□ 0.36
PRAMEF11O60813 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PRAMEF11O60813 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PRAMEF11O60813 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF11O60813 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF11O60813 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF11O60813 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF11O60813 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.29■□□□□ 0.36
PRAMEF11O60813 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PRAMEF11O60813 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PRAMEF11O60813 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.29■□□□□ 0.36
PRAMEF11O60813 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF11O60813 AP000347.1-202ENST00000435868 847 ntBASIC17.29■□□□□ 0.36
PRAMEF11O60813 FAM185BP-201ENST00000443595 716 ntBASIC17.29■□□□□ 0.36
PRAMEF11O60813 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.29■□□□□ 0.36
PRAMEF11O60813 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.29■□□□□ 0.36
PRAMEF11O60813 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF11O60813 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF11O60813 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PRAMEF11O60813 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF11O60813 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF11O60813 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF11O60813 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF11O60813 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PRAMEF11O60813 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF11O60813 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEF11O60813 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF11O60813 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms