Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ACTN4O43707 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.2■□□□□ 0.66
ACTN4O43707 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ACTN4O43707 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.2■□□□□ 0.66
ACTN4O43707 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ACTN4O43707 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.2■□□□□ 0.66
ACTN4O43707 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.2■□□□□ 0.66
ACTN4O43707 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
ACTN4O43707 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
ACTN4O43707 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.19■□□□□ 0.66
ACTN4O43707 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.19■□□□□ 0.66
ACTN4O43707 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.19■□□□□ 0.66
ACTN4O43707 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
ACTN4O43707 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.19■□□□□ 0.66
ACTN4O43707 FOSL1P1-201ENST00000511041 816 ntBASIC19.19■□□□□ 0.66
ACTN4O43707 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.19■□□□□ 0.66
ACTN4O43707 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.19■□□□□ 0.66
ACTN4O43707 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.19■□□□□ 0.66
ACTN4O43707 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
ACTN4O43707 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.19■□□□□ 0.66
ACTN4O43707 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
ACTN4O43707 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.19■□□□□ 0.66
ACTN4O43707 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.19■□□□□ 0.66
ACTN4O43707 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ACTN4O43707 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.18■□□□□ 0.66
ACTN4O43707 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ACTN4O43707 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ACTN4O43707 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.18■□□□□ 0.66
ACTN4O43707 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ACTN4O43707 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.18■□□□□ 0.66
ACTN4O43707 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ACTN4O43707 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ACTN4O43707 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ACTN4O43707 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
ACTN4O43707 BX005266.1-201ENST00000473402 457 ntBASIC19.18■□□□□ 0.66
ACTN4O43707 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ACTN4O43707 AL353135.1-201ENST00000606729 504 ntBASIC19.18■□□□□ 0.66
ACTN4O43707 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ACTN4O43707 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ACTN4O43707 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ACTN4O43707 AL590787.1-201ENST00000568856 1315 ntBASIC19.18■□□□□ 0.66
ACTN4O43707 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.18■□□□□ 0.66
ACTN4O43707 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ACTN4O43707 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ACTN4O43707 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ACTN4O43707 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ACTN4O43707 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ACTN4O43707 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.17■□□□□ 0.66
ACTN4O43707 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ACTN4O43707 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACTN4O43707 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.17■□□□□ 0.66
ACTN4O43707 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ACTN4O43707 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACTN4O43707 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACTN4O43707 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ACTN4O43707 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACTN4O43707 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.17■□□□□ 0.66
ACTN4O43707 MIR1224-201ENST00000408193 85 ntBASIC19.17■□□□□ 0.66
ACTN4O43707 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ACTN4O43707 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ACTN4O43707 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.17■□□□□ 0.66
ACTN4O43707 PRYP5-201ENST00000451909 266 ntBASIC19.17■□□□□ 0.66
ACTN4O43707 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.17■□□□□ 0.66
ACTN4O43707 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.17■□□□□ 0.66
ACTN4O43707 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.17■□□□□ 0.66
ACTN4O43707 AL732292.2-201ENST00000609649 430 ntBASIC19.17■□□□□ 0.66
ACTN4O43707 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACTN4O43707 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.17■□□□□ 0.66
ACTN4O43707 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.17■□□□□ 0.66
ACTN4O43707 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACTN4O43707 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACTN4O43707 TUBB8P12-201ENST00000308911 1335 ntBASIC19.17■□□□□ 0.66
ACTN4O43707 TUBB7P-202ENST00000428444 1305 ntBASIC19.17■□□□□ 0.66
ACTN4O43707 TUBB8P7-204ENST00000567960 1332 ntBASIC19.17■□□□□ 0.66
ACTN4O43707 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACTN4O43707 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
ACTN4O43707 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms