Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
XRCC2O43543 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.91□□□□□ -0.02
XRCC2O43543 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.91□□□□□ -0.02
XRCC2O43543 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.91□□□□□ -0.02
XRCC2O43543 FOSL1P1-201ENST00000511041 816 ntBASIC14.91□□□□□ -0.02
XRCC2O43543 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.91□□□□□ -0.02
XRCC2O43543 AL121772.3-201ENST00000610840 674 ntBASIC14.91□□□□□ -0.02
XRCC2O43543 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.91□□□□□ -0.02
XRCC2O43543 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 AC148477.5-201ENST00000625164 1645 ntBASIC14.91□□□□□ -0.02
XRCC2O43543 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 AP005117.1-201ENST00000584346 1413 ntBASIC14.91□□□□□ -0.02
XRCC2O43543 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
XRCC2O43543 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
XRCC2O43543 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.9□□□□□ -0.02
XRCC2O43543 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.9□□□□□ -0.02
XRCC2O43543 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.9□□□□□ -0.02
XRCC2O43543 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.9□□□□□ -0.02
XRCC2O43543 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.9□□□□□ -0.02
XRCC2O43543 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
XRCC2O43543 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 RBM17P3-201ENST00000417687 1192 ntBASIC14.9□□□□□ -0.02
XRCC2O43543 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
XRCC2O43543 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.9□□□□□ -0.02
XRCC2O43543 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.9□□□□□ -0.02
XRCC2O43543 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
XRCC2O43543 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.9□□□□□ -0.02
XRCC2O43543 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.9□□□□□ -0.02
XRCC2O43543 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.9□□□□□ -0.02
XRCC2O43543 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
XRCC2O43543 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
XRCC2O43543 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
XRCC2O43543 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
XRCC2O43543 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.89□□□□□ -0.03
XRCC2O43543 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.89□□□□□ -0.03
XRCC2O43543 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 UBALD1-205ENST00000590891 2641 ntBASIC14.89□□□□□ -0.03
XRCC2O43543 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.89□□□□□ -0.03
XRCC2O43543 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
XRCC2O43543 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 AC132008.2-207ENST00000454517 770 ntBASIC14.89□□□□□ -0.03
XRCC2O43543 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.89□□□□□ -0.03
XRCC2O43543 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.89□□□□□ -0.03
XRCC2O43543 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.89□□□□□ -0.03
XRCC2O43543 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.89□□□□□ -0.03
XRCC2O43543 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
XRCC2O43543 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.89□□□□□ -0.03
XRCC2O43543 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.89□□□□□ -0.03
XRCC2O43543 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.89□□□□□ -0.03
XRCC2O43543 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
XRCC2O43543 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XRCC2O43543 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
XRCC2O43543 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms