Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.4■□□□□ 0.38
RIPK2O43353 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.4■□□□□ 0.38
RIPK2O43353 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.4■□□□□ 0.38
RIPK2O43353 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.4■□□□□ 0.38
RIPK2O43353 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.4■□□□□ 0.38
RIPK2O43353 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.4■□□□□ 0.38
RIPK2O43353 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 AL353593.2-201ENST00000602529 1483 ntBASIC17.4■□□□□ 0.38
RIPK2O43353 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.4■□□□□ 0.38
RIPK2O43353 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RIPK2O43353 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.4■□□□□ 0.38
RIPK2O43353 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.4■□□□□ 0.38
RIPK2O43353 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RIPK2O43353 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.4■□□□□ 0.38
RIPK2O43353 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RIPK2O43353 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.4■□□□□ 0.38
RIPK2O43353 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RIPK2O43353 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
RIPK2O43353 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RIPK2O43353 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.4■□□□□ 0.38
RIPK2O43353 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RIPK2O43353 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 ME2P1-201ENST00000426028 1970 ntBASIC17.4■□□□□ 0.38
RIPK2O43353 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.4■□□□□ 0.38
RIPK2O43353 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RIPK2O43353 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.4■□□□□ 0.38
RIPK2O43353 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RIPK2O43353 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPK2O43353 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RIPK2O43353 Z83836.1-201ENST00000624605 1642 ntBASIC17.39■□□□□ 0.38
RIPK2O43353 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.39■□□□□ 0.38
RIPK2O43353 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RIPK2O43353 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RIPK2O43353 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.39■□□□□ 0.37
RIPK2O43353 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.39■□□□□ 0.37
RIPK2O43353 AL359075.1-203ENST00000462729 1002 ntBASIC17.39■□□□□ 0.37
RIPK2O43353 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.39■□□□□ 0.37
RIPK2O43353 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 RNF126P1-202ENST00000569893 925 ntBASIC17.39■□□□□ 0.37
RIPK2O43353 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.39■□□□□ 0.37
RIPK2O43353 AC011558.1-201ENST00000623459 338 ntBASIC17.39■□□□□ 0.37
RIPK2O43353 HYMAI-201ENST00000635591 3347 ntBASIC17.39■□□□□ 0.37
RIPK2O43353 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.39■□□□□ 0.37
RIPK2O43353 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RIPK2O43353 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.39■□□□□ 0.37
RIPK2O43353 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.39■□□□□ 0.37
RIPK2O43353 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.39■□□□□ 0.37
RIPK2O43353 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.39■□□□□ 0.37
RIPK2O43353 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPK2O43353 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.38■□□□□ 0.37
RIPK2O43353 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.38■□□□□ 0.37
RIPK2O43353 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RIPK2O43353 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.38■□□□□ 0.37
RIPK2O43353 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 HBZP1-201ENST00000354915 429 ntBASIC17.38■□□□□ 0.37
RIPK2O43353 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RIPK2O43353 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RIPK2O43353 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.38■□□□□ 0.37
RIPK2O43353 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPK2O43353 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.38■□□□□ 0.37
RIPK2O43353 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms