Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLOCKO15516 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CLOCKO15516 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.33■□□□□ 0.2
CLOCKO15516 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.33■□□□□ 0.2
CLOCKO15516 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CLOCKO15516 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.33■□□□□ 0.2
CLOCKO15516 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CLOCKO15516 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.33■□□□□ 0.2
CLOCKO15516 AL139327.4-201ENST00000612362 153 ntBASIC16.33■□□□□ 0.2
CLOCKO15516 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
CLOCKO15516 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 AC092171.3-201ENST00000610122 2651 ntBASIC16.33■□□□□ 0.2
CLOCKO15516 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.33■□□□□ 0.2
CLOCKO15516 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
CLOCKO15516 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 AC022188.1-201ENST00000620960 1664 ntBASIC16.33■□□□□ 0.2
CLOCKO15516 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLOCKO15516 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CLOCKO15516 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLOCKO15516 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.32■□□□□ 0.2
CLOCKO15516 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CLOCKO15516 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
CLOCKO15516 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.32■□□□□ 0.2
CLOCKO15516 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 AL513523.2-202ENST00000427283 2040 ntBASIC16.32■□□□□ 0.2
CLOCKO15516 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.32■□□□□ 0.2
CLOCKO15516 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLOCKO15516 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.32■□□□□ 0.2
CLOCKO15516 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.32■□□□□ 0.2
CLOCKO15516 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLOCKO15516 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLOCKO15516 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.32■□□□□ 0.2
CLOCKO15516 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.32■□□□□ 0.2
CLOCKO15516 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.32■□□□□ 0.2
CLOCKO15516 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLOCKO15516 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.32■□□□□ 0.2
CLOCKO15516 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.32■□□□□ 0.2
CLOCKO15516 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLOCKO15516 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.32■□□□□ 0.2
CLOCKO15516 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLOCKO15516 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.32■□□□□ 0.2
CLOCKO15516 AC093525.9-201ENST00000624961 1746 ntBASIC16.32■□□□□ 0.2
CLOCKO15516 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLOCKO15516 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLOCKO15516 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLOCKO15516 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.31■□□□□ 0.2
CLOCKO15516 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.31■□□□□ 0.2
CLOCKO15516 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.31■□□□□ 0.2
CLOCKO15516 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLOCKO15516 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.31■□□□□ 0.2
CLOCKO15516 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLOCKO15516 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLOCKO15516 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLOCKO15516 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLOCKO15516 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.31■□□□□ 0.2
CLOCKO15516 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLOCKO15516 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLOCKO15516 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.31■□□□□ 0.2
CLOCKO15516 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.31■□□□□ 0.2
CLOCKO15516 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.31■□□□□ 0.2
CLOCKO15516 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLOCKO15516 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.31■□□□□ 0.2
CLOCKO15516 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.31■□□□□ 0.2
CLOCKO15516 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLOCKO15516 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.31■□□□□ 0.2
CLOCKO15516 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLOCKO15516 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.31■□□□□ 0.2
CLOCKO15516 GCSHP2-201ENST00000560971 527 ntBASIC16.31■□□□□ 0.2
CLOCKO15516 MIR3917-201ENST00000580971 93 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms