Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
NDUFA1O15239 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.76□□□□□ -0.53
NDUFA1O15239 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFA1O15239 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
NDUFA1O15239 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
NDUFA1O15239 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC11.75□□□□□ -0.53
NDUFA1O15239 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
NDUFA1O15239 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC11.75□□□□□ -0.53
NDUFA1O15239 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
NDUFA1O15239 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
NDUFA1O15239 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC11.75□□□□□ -0.53
NDUFA1O15239 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 FAM8A6P-201ENST00000407496 1135 ntBASIC11.75□□□□□ -0.53
NDUFA1O15239 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC11.75□□□□□ -0.53
NDUFA1O15239 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC11.75□□□□□ -0.53
NDUFA1O15239 USF2-205ENST00000594064 1179 ntTSL 2 BASIC11.75□□□□□ -0.53
NDUFA1O15239 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.75□□□□□ -0.53
NDUFA1O15239 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.75□□□□□ -0.53
NDUFA1O15239 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
NDUFA1O15239 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
NDUFA1O15239 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
NDUFA1O15239 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
NDUFA1O15239 BANP-201ENST00000286122 2368 ntTSL 5 BASIC11.75□□□□□ -0.53
NDUFA1O15239 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
NDUFA1O15239 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NDUFA1O15239 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.74□□□□□ -0.53
NDUFA1O15239 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC11.74□□□□□ -0.53
NDUFA1O15239 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
NDUFA1O15239 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
NDUFA1O15239 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
NDUFA1O15239 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 ANKRD20A18P-201ENST00000359341 492 ntBASIC11.74□□□□□ -0.53
NDUFA1O15239 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 SLC25A1P3-201ENST00000395415 828 ntBASIC11.74□□□□□ -0.53
NDUFA1O15239 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 DDT-203ENST00000403754 569 ntTSL 3 BASIC11.74□□□□□ -0.53
NDUFA1O15239 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 DDT-206ENST00000430101 573 ntTSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 KRT18P48-201ENST00000434763 852 ntBASIC11.74□□□□□ -0.53
NDUFA1O15239 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC11.74□□□□□ -0.53
NDUFA1O15239 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
NDUFA1O15239 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC11.74□□□□□ -0.53
NDUFA1O15239 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC11.74□□□□□ -0.53
NDUFA1O15239 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.74□□□□□ -0.53
NDUFA1O15239 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.74□□□□□ -0.53
NDUFA1O15239 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC11.74□□□□□ -0.53
NDUFA1O15239 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms