Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3EO15041 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3EO15041 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3EO15041 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.48■□□□□ 0.87
SEMA3EO15041 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SEMA3EO15041 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
SEMA3EO15041 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SEMA3EO15041 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.47■□□□□ 0.87
SEMA3EO15041 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SEMA3EO15041 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SEMA3EO15041 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
SEMA3EO15041 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SEMA3EO15041 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 PMS2P4-201ENST00000412466 1052 ntBASIC20.47■□□□□ 0.87
SEMA3EO15041 TFAMP1-201ENST00000412727 736 ntBASIC20.47■□□□□ 0.87
SEMA3EO15041 SPDYE11-202ENST00000450699 704 ntBASIC20.47■□□□□ 0.87
SEMA3EO15041 TIMM8BP1-201ENST00000452384 211 ntBASIC20.47■□□□□ 0.87
SEMA3EO15041 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.47■□□□□ 0.87
SEMA3EO15041 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 KRT8P48-201ENST00000515599 1220 ntBASIC20.47■□□□□ 0.87
SEMA3EO15041 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.47■□□□□ 0.87
SEMA3EO15041 SPDYE9P-201ENST00000570642 692 ntBASIC20.47■□□□□ 0.87
SEMA3EO15041 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.47■□□□□ 0.87
SEMA3EO15041 SPDYE10P-202ENST00000612005 668 ntBASIC20.47■□□□□ 0.87
SEMA3EO15041 SPDYE8P-202ENST00000612377 668 ntBASIC20.47■□□□□ 0.87
SEMA3EO15041 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA3EO15041 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.46■□□□□ 0.87
SEMA3EO15041 AC020916.1-201ENST00000587762 1774 ntBASIC20.46■□□□□ 0.87
SEMA3EO15041 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SEMA3EO15041 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
SEMA3EO15041 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SEMA3EO15041 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SEMA3EO15041 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.46■□□□□ 0.87
SEMA3EO15041 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.46■□□□□ 0.87
SEMA3EO15041 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 AC023141.5-201ENST00000458585 616 ntBASIC20.46■□□□□ 0.87
SEMA3EO15041 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.46■□□□□ 0.87
SEMA3EO15041 MIR4492-201ENST00000581627 80 ntBASIC20.46■□□□□ 0.87
SEMA3EO15041 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
SEMA3EO15041 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.46■□□□□ 0.87
SEMA3EO15041 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.46■□□□□ 0.87
SEMA3EO15041 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.46■□□□□ 0.87
SEMA3EO15041 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SEMA3EO15041 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.46■□□□□ 0.87
SEMA3EO15041 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SEMA3EO15041 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA3EO15041 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SEMA3EO15041 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEMA3EO15041 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEMA3EO15041 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEMA3EO15041 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEMA3EO15041 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEMA3EO15041 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEMA3EO15041 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.45■□□□□ 0.86
SEMA3EO15041 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.45■□□□□ 0.86
SEMA3EO15041 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.45■□□□□ 0.86
SEMA3EO15041 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.45■□□□□ 0.86
SEMA3EO15041 HLA-J-203ENST00000494367 1087 ntBASIC20.45■□□□□ 0.86
SEMA3EO15041 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SEMA3EO15041 RFPL4AP1-201ENST00000530883 850 ntBASIC20.45■□□□□ 0.86
SEMA3EO15041 AL135744.1-201ENST00000565098 629 ntBASIC20.45■□□□□ 0.86
SEMA3EO15041 AL031055.1-201ENST00000606362 631 ntBASIC20.45■□□□□ 0.86
SEMA3EO15041 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.45■□□□□ 0.86
SEMA3EO15041 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEMA3EO15041 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEMA3EO15041 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEMA3EO15041 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEMA3EO15041 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms