Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NTN3O00634 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.06■□□□□ 0.16
NTN3O00634 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.05■□□□□ 0.16
NTN3O00634 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.05■□□□□ 0.16
NTN3O00634 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 LINC00895-201ENST00000629028 1637 ntBASIC16.05■□□□□ 0.16
NTN3O00634 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.05■□□□□ 0.16
NTN3O00634 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.05■□□□□ 0.16
NTN3O00634 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.05■□□□□ 0.16
NTN3O00634 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.05■□□□□ 0.16
NTN3O00634 AL512638.1-201ENST00000457493 794 ntBASIC16.05■□□□□ 0.16
NTN3O00634 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.05■□□□□ 0.16
NTN3O00634 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.05■□□□□ 0.16
NTN3O00634 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.05■□□□□ 0.16
NTN3O00634 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.05■□□□□ 0.16
NTN3O00634 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
NTN3O00634 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NTN3O00634 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NTN3O00634 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.05■□□□□ 0.16
NTN3O00634 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.05■□□□□ 0.16
NTN3O00634 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.05■□□□□ 0.16
NTN3O00634 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NTN3O00634 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
NTN3O00634 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.04■□□□□ 0.16
NTN3O00634 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.04■□□□□ 0.16
NTN3O00634 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.04■□□□□ 0.16
NTN3O00634 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
NTN3O00634 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.04■□□□□ 0.16
NTN3O00634 AC105233.2-201ENST00000523697 349 ntBASIC16.04■□□□□ 0.16
NTN3O00634 AF228730.5-201ENST00000530288 346 ntBASIC16.04■□□□□ 0.16
NTN3O00634 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.04■□□□□ 0.16
NTN3O00634 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NTN3O00634 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.04■□□□□ 0.16
NTN3O00634 LINC00896-202ENST00000609602 2128 ntBASIC16.04■□□□□ 0.16
NTN3O00634 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.04■□□□□ 0.16
NTN3O00634 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 AC008764.6-201ENST00000595909 2069 ntBASIC16.04■□□□□ 0.16
NTN3O00634 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.04■□□□□ 0.16
NTN3O00634 AL138688.1-201ENST00000624851 1594 ntBASIC16.04■□□□□ 0.16
NTN3O00634 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NTN3O00634 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NTN3O00634 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NTN3O00634 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NTN3O00634 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.03■□□□□ 0.16
NTN3O00634 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NTN3O00634 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NTN3O00634 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NTN3O00634 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.03■□□□□ 0.16
NTN3O00634 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NTN3O00634 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.03■□□□□ 0.16
NTN3O00634 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NTN3O00634 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NTN3O00634 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NTN3O00634 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NTN3O00634 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NTN3O00634 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.03■□□□□ 0.16
NTN3O00634 AC241585.1-201ENST00000433527 519 ntBASIC16.03■□□□□ 0.16
NTN3O00634 AC004890.2-204ENST00000481968 304 ntBASIC16.03■□□□□ 0.16
NTN3O00634 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.03■□□□□ 0.16
NTN3O00634 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NTN3O00634 RARRES2P9-201ENST00000565168 469 ntBASIC16.03■□□□□ 0.16
NTN3O00634 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.03■□□□□ 0.16
NTN3O00634 AC018529.1-201ENST00000613063 361 ntBASIC16.03■□□□□ 0.16
NTN3O00634 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.03■□□□□ 0.16
NTN3O00634 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NTN3O00634 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
NTN3O00634 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NTN3O00634 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.03■□□□□ 0.16
NTN3O00634 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NTN3O00634 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.03■□□□□ 0.16
NTN3O00634 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NTN3O00634 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms