Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 PCDHB17P-201ENST00000539533 2393 ntBASIC13.8□□□□□ -0.2
SRRM4A7MD48 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 UPK3BP1-201ENST00000428678 509 ntBASIC13.79□□□□□ -0.2
SRRM4A7MD48 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 AP001269.4-201ENST00000609611 512 ntBASIC13.79□□□□□ -0.2
SRRM4A7MD48 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.79□□□□□ -0.2
SRRM4A7MD48 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRRM4A7MD48 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 LINC00982-205ENST00000420957 435 ntBASIC13.78□□□□□ -0.2
SRRM4A7MD48 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 AC079328.2-201ENST00000561241 3354 ntBASIC13.78□□□□□ -0.2
SRRM4A7MD48 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRRM4A7MD48 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.78□□□□□ -0.2
SRRM4A7MD48 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms