Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC162PA2VCL2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC162PA2VCL2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC162PA2VCL2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC162PA2VCL2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC162PA2VCL2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC162PA2VCL2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC162PA2VCL2 AC011676.5-201ENST00000624864 2660 ntBASIC17.14■□□□□ 0.33
CCDC162PA2VCL2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 NCF1C-201ENST00000438382 1427 ntBASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 AL162727.3-201ENST00000635661 2787 ntBASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 AL590787.1-201ENST00000568856 1315 ntBASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC162PA2VCL2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 SCARNA2-201ENST00000458748 420 ntBASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 AC021087.4-201ENST00000563761 564 ntBASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC162PA2VCL2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 EMBP1-201ENST00000458200 901 ntBASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms