Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
LINC01558Q9Y6Z2 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 AC027601.5-201ENST00000624065 2482 ntBASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 ABHD17AP3-201ENST00000503096 1137 ntBASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 MIR3648-2-201ENST00000581792 180 ntBASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 AC099791.2-201ENST00000605725 427 ntBASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 AC243732.1-201ENST00000612648 864 ntBASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 MIR3648-1-201ENST00000615959 180 ntBASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 ABR-205ENST00000544583 5595 ntTSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 ME2P1-201ENST00000426028 1970 ntBASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 POR-201ENST00000394893 2532 ntTSL 5 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms