Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC093909.1-201ENST00000504731 1122 ntBASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 PRORSD1P-202ENST00000563365 2154 ntBASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3AQ9Y2J0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 PRYP5-201ENST00000451909 266 ntBASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 KRT18P58-201ENST00000527480 1120 ntBASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 MIR7706-201ENST00000613747 67 ntBASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3AQ9Y2J0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 RNA5SP419-201ENST00000515908 135 ntBASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 AC107918.4-202ENST00000641623 219 ntBASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RPH3AQ9Y2J0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 AL135999.2-201ENST00000622438 1686 ntBASIC15.73■□□□□ 0.11
RPH3AQ9Y2J0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms