Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LHX6Q9UPM6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 MIR1909-201ENST00000411312 80 ntBASIC16.23■□□□□ 0.19
LHX6Q9UPM6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 AL158211.3-201ENST00000607385 239 ntBASIC16.23■□□□□ 0.19
LHX6Q9UPM6 AC009118.2-201ENST00000613275 655 ntBASIC16.23■□□□□ 0.19
LHX6Q9UPM6 GGTLC5P-201ENST00000617623 998 ntBASIC16.23■□□□□ 0.19
LHX6Q9UPM6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.23■□□□□ 0.19
LHX6Q9UPM6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 OR7E47P-204ENST00000575924 449 ntBASIC16.22■□□□□ 0.19
LHX6Q9UPM6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 AC092919.2-201ENST00000623631 1645 ntBASIC16.22■□□□□ 0.19
LHX6Q9UPM6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LHX6Q9UPM6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 CROCCP3-202ENST00000420820 1947 ntBASIC16.21■□□□□ 0.19
LHX6Q9UPM6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms