Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA1Q9UND3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA1Q9UND3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA1Q9UND3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.13
NPIPA1Q9UND3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA1Q9UND3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 AC019129.2-201ENST00000609837 1235 ntBASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 REXO1L11P-201ENST00000620964 1927 ntBASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA1Q9UND3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 LTB4R2-202ENST00000528054 3092 ntBASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 CRYGEP-201ENST00000412192 528 ntBASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 STK19B-204ENST00000512515 211 ntBASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 MIR4751-201ENST00000578027 74 ntBASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA1Q9UND3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 FER1L4-210ENST00000615531 5998 ntBASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NPIPA1Q9UND3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms