Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 AC112482.1-201ENST00000492080 688 ntBASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
UBQLN1Q9UMX0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 DUX4L17-201ENST00000557360 1267 ntBASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 TOP3BP1-201ENST00000420768 1380 ntBASIC18.3■□□□□ 0.52
UBQLN1Q9UMX0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 C20orf181-201ENST00000623918 480 ntBASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 AL645728.2-201ENST00000641974 660 ntBASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 AL021920.2-201ENST00000624828 1351 ntBASIC18.29■□□□□ 0.52
UBQLN1Q9UMX0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms