Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 MIR3687-2-201ENST00000577708 61 ntBASIC18.04■□□□□ 0.48
CDH9Q9ULB4 AC005412.3-201ENST00000580309 715 ntBASIC18.04■□□□□ 0.48
CDH9Q9ULB4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 MIR3687-1-201ENST00000614492 61 ntBASIC18.04■□□□□ 0.48
CDH9Q9ULB4 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH9Q9ULB4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 OR6D1P-202ENST00000641007 5290 ntBASIC18.03■□□□□ 0.48
CDH9Q9ULB4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 RPSAP43-201ENST00000402237 625 ntBASIC18.03■□□□□ 0.48
CDH9Q9ULB4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 AC074386.1-202ENST00000463561 864 ntBASIC18.03■□□□□ 0.48
CDH9Q9ULB4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 AC010327.4-202ENST00000591484 748 ntBASIC18.03■□□□□ 0.48
CDH9Q9ULB4 AC006538.3-201ENST00000612495 578 ntBASIC18.03■□□□□ 0.48
CDH9Q9ULB4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 TOP3BP1-201ENST00000420768 1380 ntBASIC18.03■□□□□ 0.48
CDH9Q9ULB4 AL021920.2-201ENST00000624828 1351 ntBASIC18.03■□□□□ 0.48
CDH9Q9ULB4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH9Q9ULB4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 MIR1233-2-201ENST00000408138 82 ntBASIC18.02■□□□□ 0.48
CDH9Q9ULB4 MIR1233-1-201ENST00000408722 82 ntBASIC18.02■□□□□ 0.48
CDH9Q9ULB4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 GPALPP1-207ENST00000611650 899 ntBASIC18.02■□□□□ 0.48
CDH9Q9ULB4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 AL645728.2-201ENST00000641974 660 ntBASIC18.02■□□□□ 0.48
CDH9Q9ULB4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH9Q9ULB4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH9Q9ULB4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CDH9Q9ULB4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH9Q9ULB4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH9Q9ULB4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH9Q9ULB4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms