Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 TIMM8BP1-201ENST00000452384 211 ntBASIC19.24■□□□□ 0.67
COL20A1Q9P218 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL20A1Q9P218 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 AL009183.1-201ENST00000603760 355 ntBASIC19.24■□□□□ 0.67
COL20A1Q9P218 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL20A1Q9P218 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL20A1Q9P218 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL20A1Q9P218 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL20A1Q9P218 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL20A1Q9P218 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL20A1Q9P218 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL20A1Q9P218 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.23■□□□□ 0.67
COL20A1Q9P218 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COL20A1Q9P218 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.23■□□□□ 0.67
COL20A1Q9P218 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
COL20A1Q9P218 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.23■□□□□ 0.67
COL20A1Q9P218 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COL20A1Q9P218 MPDU1-223ENST00000582151 728 ntBASIC19.23■□□□□ 0.67
COL20A1Q9P218 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 AC004835.2-201ENST00000603762 682 ntBASIC19.23■□□□□ 0.67
COL20A1Q9P218 AC026120.1-201ENST00000611536 926 ntBASIC19.23■□□□□ 0.67
COL20A1Q9P218 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.23■□□□□ 0.67
COL20A1Q9P218 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 AC139713.2-201ENST00000641328 2723 ntBASIC19.23■□□□□ 0.67
COL20A1Q9P218 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL20A1Q9P218 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL20A1Q9P218 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL20A1Q9P218 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL20A1Q9P218 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL20A1Q9P218 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL20A1Q9P218 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL20A1Q9P218 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL20A1Q9P218 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL20A1Q9P218 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL20A1Q9P218 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL20A1Q9P218 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL20A1Q9P218 TSEN15P1-201ENST00000423257 515 ntBASIC19.22■□□□□ 0.67
COL20A1Q9P218 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 RFPL4AP1-201ENST00000530883 850 ntBASIC19.22■□□□□ 0.67
COL20A1Q9P218 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 AC243562.1-201ENST00000560672 389 ntBASIC19.22■□□□□ 0.67
COL20A1Q9P218 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 AC091167.2-201ENST00000579581 588 ntBASIC19.22■□□□□ 0.67
COL20A1Q9P218 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 AC093028.1-201ENST00000622998 982 ntBASIC19.22■□□□□ 0.67
COL20A1Q9P218 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 KRT8P49-201ENST00000604166 1432 ntBASIC19.22■□□□□ 0.67
COL20A1Q9P218 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL20A1Q9P218 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL20A1Q9P218 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
COL20A1Q9P218 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL20A1Q9P218 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL20A1Q9P218 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.21■□□□□ 0.67
COL20A1Q9P218 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms