Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 AC099398.1-201ENST00000567919 2776 ntBASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 AC008667.4-201ENST00000607370 168 ntBASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 REXO1L3P-201ENST00000622202 1288 ntBASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 TUBB8P12-201ENST00000308911 1335 ntBASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 TUBB7P-202ENST00000428444 1305 ntBASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 TUBB8P7-204ENST00000567960 1332 ntBASIC19■□□□□ 0.63
BLOC1S4Q9NUP1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 IGHV3-65-201ENST00000523210 341 ntBASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 AC117500.6-201ENST00000624871 588 ntBASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 KRT8P49-201ENST00000604166 1432 ntBASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 HLA-A-201ENST00000376802 1334 ntBASIC18.99■□□□□ 0.63
BLOC1S4Q9NUP1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.98■□□□□ 0.63
BLOC1S4Q9NUP1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms