Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.83■□□□□ 0.93
ECHDC1Q9NTX5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.83■□□□□ 0.93
ECHDC1Q9NTX5 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ECHDC1Q9NTX5 AC002310.6-201ENST00000624451 1377 ntBASIC20.83■□□□□ 0.92
ECHDC1Q9NTX5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
ECHDC1Q9NTX5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ECHDC1Q9NTX5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 AC108073.2-201ENST00000464002 357 ntBASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 RNA5SP415-201ENST00000517246 115 ntBASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 UNC93B6-202ENST00000528242 690 ntBASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.82■□□□□ 0.92
ECHDC1Q9NTX5 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 AC105020.1-201ENST00000435356 2205 ntBASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 AC005915.1-201ENST00000624912 2018 ntBASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.81■□□□□ 0.92
ECHDC1Q9NTX5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 AC009947.1-201ENST00000444350 727 ntBASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 AC108751.1-201ENST00000490852 363 ntBASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 REXO1L3P-201ENST00000622202 1288 ntBASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 AC004790.2-201ENST00000623588 572 ntBASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ECHDC1Q9NTX5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 TUBB8P12-201ENST00000308911 1335 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms