Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 AP002414.1-201ENST00000391405 1147 ntBASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 AC098831.1-202ENST00000438821 336 ntBASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 AL590787.1-201ENST00000568856 1315 ntBASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 AC120114.3-201ENST00000611923 658 ntBASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 FRMD8P1-201ENST00000440433 1524 ntBASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRDM9Q9NQV7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 AC099398.1-201ENST00000567919 2776 ntBASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms