Protein–RNA interactions for Protein: Q9HC58

SLC24A3, Sodium/potassium/calcium exchanger 3, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC24A3Q9HC58 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC24A3Q9HC58 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC24A3Q9HC58 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC24A3Q9HC58 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLC24A3Q9HC58 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC24A3Q9HC58 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLC24A3Q9HC58 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC24A3Q9HC58 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC24A3Q9HC58 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC24A3Q9HC58 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC24A3Q9HC58 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC24A3Q9HC58 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC24A3Q9HC58 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC24A3Q9HC58 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 AC079781.5-202ENST00000641784 3743 ntBASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 AL671277.2-201ENST00000458060 996 ntBASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 AC011558.1-201ENST00000623459 338 ntBASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 TNRC18P2-201ENST00000417666 2714 ntBASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 AC006449.5-201ENST00000610658 2098 ntBASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC24A3Q9HC58 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 SDHAP1-207ENST00000440850 2000 ntBASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 TPM4P1-201ENST00000436100 807 ntBASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 FAM86EP-206ENST00000510506 987 ntBASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 AL160286.2-201ENST00000567150 934 ntBASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC24A3Q9HC58 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
SLC24A3Q9HC58 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC24A3Q9HC58 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
SLC24A3Q9HC58 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.29
SLC24A3Q9HC58 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC24A3Q9HC58 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC24A3Q9HC58 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms