Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH20Q9HBT6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.02□□□□□ -0.01
CDH20Q9HBT6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CDH20Q9HBT6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 CROCCP2-202ENST00000412962 2773 ntBASIC15.01□□□□□ -0.01
CDH20Q9HBT6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 RPS2P28-201ENST00000314255 741 ntBASIC15.01□□□□□ -0.01
CDH20Q9HBT6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 ACTG1P4-201ENST00000425123 1122 ntBASIC15.01□□□□□ -0.01
CDH20Q9HBT6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 AP002469.2-201ENST00000531724 424 ntBASIC15.01□□□□□ -0.01
CDH20Q9HBT6 AL589182.2-201ENST00000619332 1049 ntBASIC15.01□□□□□ -0.01
CDH20Q9HBT6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH20Q9HBT6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15□□□□□ -0.01
CDH20Q9HBT6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15□□□□□ -0.01
CDH20Q9HBT6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15□□□□□ -0.01
CDH20Q9HBT6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15□□□□□ -0.01
CDH20Q9HBT6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15□□□□□ -0.01
CDH20Q9HBT6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15□□□□□ -0.01
CDH20Q9HBT6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15□□□□□ -0.01
CDH20Q9HBT6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15□□□□□ -0.01
CDH20Q9HBT6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15□□□□□ -0.01
CDH20Q9HBT6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15□□□□□ -0.01
CDH20Q9HBT6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15□□□□□ -0.01
CDH20Q9HBT6 MED22-202ENST00000371999 987 ntTSL 3 BASIC15□□□□□ -0.01
CDH20Q9HBT6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15□□□□□ -0.01
CDH20Q9HBT6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15□□□□□ -0.01
CDH20Q9HBT6 LINC00982-205ENST00000420957 435 ntBASIC15□□□□□ -0.01
CDH20Q9HBT6 LAGE3P1-201ENST00000425356 484 ntBASIC15□□□□□ -0.01
CDH20Q9HBT6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15□□□□□ -0.01
CDH20Q9HBT6 RPS2P1-201ENST00000434010 821 ntBASIC15□□□□□ -0.01
CDH20Q9HBT6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15□□□□□ -0.01
CDH20Q9HBT6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15□□□□□ -0.01
CDH20Q9HBT6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15□□□□□ -0.01
CDH20Q9HBT6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15□□□□□ -0.01
CDH20Q9HBT6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15□□□□□ -0.01
CDH20Q9HBT6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15□□□□□ -0.01
CDH20Q9HBT6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CDH20Q9HBT6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15□□□□□ -0.01
CDH20Q9HBT6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDH20Q9HBT6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDH20Q9HBT6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15□□□□□ -0.01
CDH20Q9HBT6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15□□□□□ -0.01
CDH20Q9HBT6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDH20Q9HBT6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH20Q9HBT6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms