Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 MRPL20P1-201ENST00000400819 433 ntBASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 RPS8P6-201ENST00000426177 609 ntBASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 PRSS29P-201ENST00000440800 595 ntBASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP6V0A4Q9HBG4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 AC011270.2-201ENST00000624293 2550 ntBASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 CRYGEP-201ENST00000412192 528 ntBASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 PAWRP1-201ENST00000451083 565 ntBASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 AC004967.1-201ENST00000453589 447 ntBASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 AC010654.1-201ENST00000615722 808 ntBASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP6V0A4Q9HBG4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP6V0A4Q9HBG4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP6V0A4Q9HBG4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ATP6V0A4Q9HBG4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ATP6V0A4Q9HBG4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.02■□□□□ 0.63
ATP6V0A4Q9HBG4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP6V0A4Q9HBG4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 KRT18P2-201ENST00000447938 1258 ntBASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 AP001160.2-201ENST00000596071 487 ntBASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 PP12613-201ENST00000424958 2230 ntBASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP6V0A4Q9HBG4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 VN2R19P-201ENST00000442399 1052 ntBASIC19■□□□□ 0.63
ATP6V0A4Q9HBG4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms