Protein–RNA interactions for Protein: Q9C0K0

BCL11B, B-cell lymphoma/leukemia 11B, humanhuman

Predicted RBP Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL11BQ9C0K0 HILS1-202ENST00000545329 423 ntBASIC22.12■■□□□ 1.13
BCL11BQ9C0K0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
BCL11BQ9C0K0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
BCL11BQ9C0K0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
BCL11BQ9C0K0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC22.12■■□□□ 1.13
BCL11BQ9C0K0 AC244517.3-201ENST00000616254 1235 ntBASIC22.12■■□□□ 1.13
BCL11BQ9C0K0 AL589935.2-201ENST00000616471 1231 ntBASIC22.12■■□□□ 1.13
BCL11BQ9C0K0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC22.12■■□□□ 1.13
BCL11BQ9C0K0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
BCL11BQ9C0K0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC22.12■■□□□ 1.13
BCL11BQ9C0K0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 TMPRSS11CP-201ENST00000453277 683 ntBASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 AC010336.2-201ENST00000564226 506 ntBASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 AC005412.3-201ENST00000580309 715 ntBASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 AC027307.2-201ENST00000591252 911 ntBASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.11■■□□□ 1.13
BCL11BQ9C0K0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
BCL11BQ9C0K0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 AL139384.1-201ENST00000612143 3047 ntBASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 AC012569.1-201ENST00000591191 1524 ntBASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
BCL11BQ9C0K0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
BCL11BQ9C0K0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
BCL11BQ9C0K0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC22.08■■□□□ 1.13
BCL11BQ9C0K0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms